Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.55□□□□□ -0.4
CDK5Q00535 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CDK5Q00535 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CDK5Q00535 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CDK5Q00535 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CDK5Q00535 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.55□□□□□ -0.4
CDK5Q00535 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CDK5Q00535 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CDK5Q00535 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.55□□□□□ -0.4
CDK5Q00535 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.55□□□□□ -0.4
CDK5Q00535 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.55□□□□□ -0.4
CDK5Q00535 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.55□□□□□ -0.4
CDK5Q00535 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.55□□□□□ -0.4
CDK5Q00535 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.55□□□□□ -0.4
CDK5Q00535 AC007279.1-201ENST00000448547 837 ntBASIC12.55□□□□□ -0.4
CDK5Q00535 CROCCP4-201ENST00000457096 498 ntBASIC12.55□□□□□ -0.4
CDK5Q00535 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 RN7SL277P-201ENST00000481521 288 ntBASIC12.55□□□□□ -0.4
CDK5Q00535 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CDK5Q00535 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.55□□□□□ -0.4
CDK5Q00535 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.55□□□□□ -0.4
CDK5Q00535 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.55□□□□□ -0.4
CDK5Q00535 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.55□□□□□ -0.4
CDK5Q00535 AC091271.1-201ENST00000611877 1162 ntBASIC12.55□□□□□ -0.4
CDK5Q00535 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.55□□□□□ -0.4
CDK5Q00535 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC12.55□□□□□ -0.4
CDK5Q00535 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.55□□□□□ -0.4
CDK5Q00535 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.55□□□□□ -0.4
CDK5Q00535 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC12.55□□□□□ -0.4
CDK5Q00535 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC12.55□□□□□ -0.4
CDK5Q00535 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CDK5Q00535 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.55□□□□□ -0.4
CDK5Q00535 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CDK5Q00535 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDK5Q00535 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDK5Q00535 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.54□□□□□ -0.4
CDK5Q00535 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDK5Q00535 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDK5Q00535 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CDK5Q00535 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDK5Q00535 AC004554.1-201ENST00000422830 1468 ntBASIC12.54□□□□□ -0.4
CDK5Q00535 RCC2P5-201ENST00000492126 1487 ntBASIC12.54□□□□□ -0.4
CDK5Q00535 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDK5Q00535 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.54□□□□□ -0.4
CDK5Q00535 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.54□□□□□ -0.4
CDK5Q00535 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDK5Q00535 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDK5Q00535 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDK5Q00535 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDK5Q00535 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.54□□□□□ -0.4
CDK5Q00535 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
CDK5Q00535 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.54□□□□□ -0.4
CDK5Q00535 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CDK5Q00535 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CDK5Q00535 AC005740.1-201ENST00000515639 522 ntBASIC12.54□□□□□ -0.4
CDK5Q00535 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.54□□□□□ -0.4
CDK5Q00535 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.54□□□□□ -0.4
CDK5Q00535 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.54□□□□□ -0.4
CDK5Q00535 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CDK5Q00535 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.54□□□□□ -0.4
CDK5Q00535 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CDK5Q00535 MIR3940-201ENST00000579148 102 ntBASIC12.54□□□□□ -0.4
CDK5Q00535 EEF1DP1-201ENST00000585891 896 ntBASIC12.54□□□□□ -0.4
CDK5Q00535 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.54□□□□□ -0.4
CDK5Q00535 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.54□□□□□ -0.4
CDK5Q00535 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.54□□□□□ -0.4
CDK5Q00535 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.54□□□□□ -0.4
CDK5Q00535 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDK5Q00535 AC079336.7-201ENST00000623428 1078 ntBASIC12.54□□□□□ -0.4
CDK5Q00535 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDK5Q00535 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CDK5Q00535 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CDK5Q00535 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDK5Q00535 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CDK5Q00535 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDK5Q00535 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDK5Q00535 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDK5Q00535 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC12.54□□□□□ -0.4
CDK5Q00535 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CDK5Q00535 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.54□□□□□ -0.4
CDK5Q00535 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms