Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.48□□□□□ -0.41
CLRN1P58418 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLRN1P58418 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLRN1P58418 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLRN1P58418 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CLRN1P58418 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CLRN1P58418 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CLRN1P58418 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLRN1P58418 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.48□□□□□ -0.41
CLRN1P58418 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.48□□□□□ -0.41
CLRN1P58418 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLRN1P58418 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLRN1P58418 KRT8P13-201ENST00000463294 1010 ntBASIC12.48□□□□□ -0.41
CLRN1P58418 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.48□□□□□ -0.41
CLRN1P58418 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.48□□□□□ -0.41
CLRN1P58418 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.48□□□□□ -0.41
CLRN1P58418 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.48□□□□□ -0.41
CLRN1P58418 RN7SL455P-201ENST00000580629 282 ntBASIC12.48□□□□□ -0.41
CLRN1P58418 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.48□□□□□ -0.41
CLRN1P58418 NDUFV2P1-201ENST00000596415 907 ntBASIC12.48□□□□□ -0.41
CLRN1P58418 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.48□□□□□ -0.41
CLRN1P58418 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.48□□□□□ -0.41
CLRN1P58418 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.48□□□□□ -0.41
CLRN1P58418 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLRN1P58418 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CLRN1P58418 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLRN1P58418 AC067931.2-201ENST00000623655 2003 ntBASIC12.48□□□□□ -0.41
CLRN1P58418 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.48□□□□□ -0.41
CLRN1P58418 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLRN1P58418 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLRN1P58418 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.48□□□□□ -0.41
CLRN1P58418 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.48□□□□□ -0.41
CLRN1P58418 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLRN1P58418 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLRN1P58418 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CLRN1P58418 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CLRN1P58418 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLRN1P58418 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLRN1P58418 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLRN1P58418 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLRN1P58418 AC093462.1-201ENST00000621167 1683 ntBASIC12.48□□□□□ -0.41
CLRN1P58418 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.48□□□□□ -0.41
CLRN1P58418 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLRN1P58418 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLRN1P58418 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLRN1P58418 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.48□□□□□ -0.41
CLRN1P58418 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CLRN1P58418 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLRN1P58418 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC12.47□□□□□ -0.41
CLRN1P58418 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.47□□□□□ -0.41
CLRN1P58418 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CLRN1P58418 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.47□□□□□ -0.41
CLRN1P58418 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.47□□□□□ -0.41
CLRN1P58418 AC138028.6-201ENST00000616106 1482 ntBASIC12.47□□□□□ -0.41
CLRN1P58418 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CLRN1P58418 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.47□□□□□ -0.41
CLRN1P58418 AL358781.1-202ENST00000321081 1360 ntBASIC12.47□□□□□ -0.41
CLRN1P58418 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.47□□□□□ -0.41
CLRN1P58418 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CLRN1P58418 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CLRN1P58418 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 AC073869.2-201ENST00000417338 1026 ntBASIC12.47□□□□□ -0.41
CLRN1P58418 ISCA2P1-201ENST00000425548 448 ntBASIC12.47□□□□□ -0.41
CLRN1P58418 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.47□□□□□ -0.41
CLRN1P58418 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CLRN1P58418 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.47□□□□□ -0.41
CLRN1P58418 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.47□□□□□ -0.41
CLRN1P58418 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.47□□□□□ -0.41
CLRN1P58418 LINC01783-202ENST00000614408 828 ntBASIC12.47□□□□□ -0.41
CLRN1P58418 MIR6769A-201ENST00000617340 73 ntBASIC12.47□□□□□ -0.41
CLRN1P58418 BX284668.2-205ENST00000619677 828 ntBASIC12.47□□□□□ -0.41
CLRN1P58418 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.47□□□□□ -0.41
CLRN1P58418 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.47□□□□□ -0.41
CLRN1P58418 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.47□□□□□ -0.41
CLRN1P58418 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLRN1P58418 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms