Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
GFRA1P56159 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
GFRA1P56159 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.41□□□□□ -0.42
GFRA1P56159 AL365181.1-201ENST00000564032 1828 ntBASIC12.41□□□□□ -0.42
GFRA1P56159 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 AL365181.3-201ENST00000605886 3222 ntBASIC12.41□□□□□ -0.42
GFRA1P56159 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
GFRA1P56159 AC073869.1-201ENST00000415574 2762 ntBASIC12.41□□□□□ -0.42
GFRA1P56159 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GFRA1P56159 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.41□□□□□ -0.42
GFRA1P56159 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
GFRA1P56159 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.4□□□□□ -0.42
GFRA1P56159 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.4□□□□□ -0.42
GFRA1P56159 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC12.4□□□□□ -0.42
GFRA1P56159 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.4□□□□□ -0.42
GFRA1P56159 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.4□□□□□ -0.42
GFRA1P56159 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.4□□□□□ -0.42
GFRA1P56159 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.4□□□□□ -0.42
GFRA1P56159 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.4□□□□□ -0.42
GFRA1P56159 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.4□□□□□ -0.42
GFRA1P56159 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC12.4□□□□□ -0.42
GFRA1P56159 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC12.4□□□□□ -0.42
GFRA1P56159 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC12.4□□□□□ -0.42
GFRA1P56159 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC12.4□□□□□ -0.42
GFRA1P56159 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC12.4□□□□□ -0.42
GFRA1P56159 AC084752.1-201ENST00000509766 622 ntBASIC12.4□□□□□ -0.42
GFRA1P56159 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC12.4□□□□□ -0.42
GFRA1P56159 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
GFRA1P56159 DLK1-205ENST00000556051 469 ntTSL 2 BASIC12.4□□□□□ -0.42
GFRA1P56159 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.4□□□□□ -0.42
GFRA1P56159 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 NAMA-206ENST00000605377 509 ntTSL 5 BASIC12.4□□□□□ -0.42
GFRA1P56159 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 MIR8071-1-201ENST00000616769 65 ntBASIC12.4□□□□□ -0.42
GFRA1P56159 MIR8071-2-201ENST00000616772 65 ntBASIC12.4□□□□□ -0.42
GFRA1P56159 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC12.4□□□□□ -0.42
GFRA1P56159 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC12.4□□□□□ -0.42
GFRA1P56159 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
GFRA1P56159 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
GFRA1P56159 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
GFRA1P56159 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
GFRA1P56159 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
GFRA1P56159 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
GFRA1P56159 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
GFRA1P56159 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
GFRA1P56159 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
GFRA1P56159 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
GFRA1P56159 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
GFRA1P56159 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.39□□□□□ -0.43
GFRA1P56159 CTBP2P8-201ENST00000422584 1330 ntBASIC12.39□□□□□ -0.43
GFRA1P56159 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.39□□□□□ -0.43
GFRA1P56159 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.39□□□□□ -0.43
GFRA1P56159 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.39□□□□□ -0.43
GFRA1P56159 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.39□□□□□ -0.43
GFRA1P56159 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.39□□□□□ -0.43
GFRA1P56159 AC092115.1-201ENST00000566277 1402 ntBASIC12.39□□□□□ -0.43
GFRA1P56159 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
GFRA1P56159 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
GFRA1P56159 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
GFRA1P56159 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms