Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CACNA2D1P54289 ODCP-201ENST00000459650 1639 ntBASIC14.77□□□□□ -0.04
CACNA2D1P54289 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CACNA2D1P54289 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CACNA2D1P54289 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CACNA2D1P54289 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.77□□□□□ -0.04
CACNA2D1P54289 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CACNA2D1P54289 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CACNA2D1P54289 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CACNA2D1P54289 AC004554.1-201ENST00000422830 1468 ntBASIC14.77□□□□□ -0.04
CACNA2D1P54289 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CACNA2D1P54289 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CACNA2D1P54289 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.77□□□□□ -0.04
CACNA2D1P54289 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CACNA2D1P54289 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.77□□□□□ -0.04
CACNA2D1P54289 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CACNA2D1P54289 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CACNA2D1P54289 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CACNA2D1P54289 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC14.77□□□□□ -0.05
CACNA2D1P54289 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.77□□□□□ -0.05
CACNA2D1P54289 AC092573.1-201ENST00000433054 884 ntBASIC14.77□□□□□ -0.05
CACNA2D1P54289 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CACNA2D1P54289 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.77□□□□□ -0.05
CACNA2D1P54289 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.77□□□□□ -0.05
CACNA2D1P54289 CR383656.3-201ENST00000551315 183 ntBASIC14.77□□□□□ -0.05
CACNA2D1P54289 KRT8P2-201ENST00000556193 944 ntBASIC14.77□□□□□ -0.05
CACNA2D1P54289 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.77□□□□□ -0.05
CACNA2D1P54289 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
CACNA2D1P54289 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
CACNA2D1P54289 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.77□□□□□ -0.05
CACNA2D1P54289 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.77□□□□□ -0.05
CACNA2D1P54289 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CACNA2D1P54289 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CACNA2D1P54289 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
CACNA2D1P54289 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.77□□□□□ -0.05
CACNA2D1P54289 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CACNA2D1P54289 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CACNA2D1P54289 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CACNA2D1P54289 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
CACNA2D1P54289 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CACNA2D1P54289 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA2D1P54289 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA2D1P54289 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CACNA2D1P54289 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
CACNA2D1P54289 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.76□□□□□ -0.05
CACNA2D1P54289 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.76□□□□□ -0.05
CACNA2D1P54289 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA2D1P54289 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA2D1P54289 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CACNA2D1P54289 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CACNA2D1P54289 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA2D1P54289 DDC-204ENST00000426377 1700 ntTSL 3 BASIC14.76□□□□□ -0.05
CACNA2D1P54289 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA2D1P54289 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.76□□□□□ -0.05
CACNA2D1P54289 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA2D1P54289 AL354861.1-201ENST00000445213 355 ntBASIC14.76□□□□□ -0.05
CACNA2D1P54289 STK24P1-201ENST00000455035 1291 ntBASIC14.76□□□□□ -0.05
CACNA2D1P54289 AC104784.1-201ENST00000473096 294 ntBASIC14.76□□□□□ -0.05
CACNA2D1P54289 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.76□□□□□ -0.05
CACNA2D1P54289 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
CACNA2D1P54289 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CACNA2D1P54289 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.76□□□□□ -0.05
CACNA2D1P54289 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA2D1P54289 U62317.3-201ENST00000608319 855 ntBASIC14.76□□□□□ -0.05
CACNA2D1P54289 RN7SL736P-201ENST00000613111 269 ntBASIC14.76□□□□□ -0.05
CACNA2D1P54289 AP003419.4-201ENST00000616071 517 ntBASIC14.76□□□□□ -0.05
CACNA2D1P54289 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA2D1P54289 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA2D1P54289 AC130686.1-201ENST00000622936 2466 ntBASIC14.76□□□□□ -0.05
CACNA2D1P54289 FMO6P-201ENST00000236166 1620 ntBASIC14.76□□□□□ -0.05
CACNA2D1P54289 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA2D1P54289 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA2D1P54289 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA2D1P54289 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA2D1P54289 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA2D1P54289 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CACNA2D1P54289 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA2D1P54289 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA2D1P54289 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.76□□□□□ -0.05
CACNA2D1P54289 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA2D1P54289 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA2D1P54289 AC061965.1-201ENST00000560524 1465 ntBASIC14.76□□□□□ -0.05
CACNA2D1P54289 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CACNA2D1P54289 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CACNA2D1P54289 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA2D1P54289 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA2D1P54289 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 AC093462.1-201ENST00000621167 1683 ntBASIC14.75□□□□□ -0.05
CACNA2D1P54289 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA2D1P54289 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA2D1P54289 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CACNA2D1P54289 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.75□□□□□ -0.05
CACNA2D1P54289 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.75□□□□□ -0.05
CACNA2D1P54289 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms