Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
BRCC3P46736 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.7□□□□□ -0.06
BRCC3P46736 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
BRCC3P46736 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
BRCC3P46736 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.7□□□□□ -0.06
BRCC3P46736 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC14.7□□□□□ -0.06
BRCC3P46736 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC14.7□□□□□ -0.06
BRCC3P46736 AC041040.1-201ENST00000425197 460 ntBASIC14.7□□□□□ -0.06
BRCC3P46736 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC14.7□□□□□ -0.06
BRCC3P46736 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC14.7□□□□□ -0.06
BRCC3P46736 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC14.7□□□□□ -0.06
BRCC3P46736 AC079250.1-201ENST00000456046 531 ntBASIC14.7□□□□□ -0.06
BRCC3P46736 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC14.7□□□□□ -0.06
BRCC3P46736 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC14.7□□□□□ -0.06
BRCC3P46736 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC14.7□□□□□ -0.06
BRCC3P46736 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
BRCC3P46736 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC14.7□□□□□ -0.06
BRCC3P46736 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC14.7□□□□□ -0.06
BRCC3P46736 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
BRCC3P46736 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC14.7□□□□□ -0.06
BRCC3P46736 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 SALL4P6-201ENST00000429385 1691 ntBASIC14.7□□□□□ -0.06
BRCC3P46736 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
BRCC3P46736 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.7□□□□□ -0.06
BRCC3P46736 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.7□□□□□ -0.06
BRCC3P46736 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.7□□□□□ -0.06
BRCC3P46736 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
BRCC3P46736 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCC3P46736 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCC3P46736 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCC3P46736 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BRCC3P46736 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCC3P46736 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.69□□□□□ -0.06
BRCC3P46736 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.69□□□□□ -0.06
BRCC3P46736 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BRCC3P46736 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
BRCC3P46736 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCC3P46736 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCC3P46736 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
BRCC3P46736 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCC3P46736 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCC3P46736 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC14.69□□□□□ -0.06
BRCC3P46736 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCC3P46736 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BRCC3P46736 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.69□□□□□ -0.06
BRCC3P46736 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCC3P46736 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC14.69□□□□□ -0.06
BRCC3P46736 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC14.69□□□□□ -0.06
BRCC3P46736 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC14.69□□□□□ -0.06
BRCC3P46736 KRT18P4-201ENST00000422599 1288 ntBASIC14.69□□□□□ -0.06
BRCC3P46736 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC14.69□□□□□ -0.06
BRCC3P46736 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC14.69□□□□□ -0.06
BRCC3P46736 ASS1P2-201ENST00000439895 1223 ntBASIC14.69□□□□□ -0.06
BRCC3P46736 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC14.69□□□□□ -0.06
BRCC3P46736 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC14.69□□□□□ -0.06
BRCC3P46736 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC14.69□□□□□ -0.06
BRCC3P46736 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.69□□□□□ -0.06
BRCC3P46736 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC14.69□□□□□ -0.06
BRCC3P46736 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.69□□□□□ -0.06
BRCC3P46736 HMGB1P24-201ENST00000611897 328 ntBASIC14.69□□□□□ -0.06
BRCC3P46736 AC244250.3-201ENST00000620749 366 ntBASIC14.69□□□□□ -0.06
BRCC3P46736 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC14.69□□□□□ -0.06
BRCC3P46736 AC026336.4-201ENST00000624565 1050 ntBASIC14.69□□□□□ -0.06
BRCC3P46736 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
BRCC3P46736 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC14.69□□□□□ -0.06
BRCC3P46736 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCC3P46736 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
BRCC3P46736 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCC3P46736 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCC3P46736 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
BRCC3P46736 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC14.69□□□□□ -0.06
BRCC3P46736 AC005014.1-201ENST00000432006 2976 ntBASIC14.69□□□□□ -0.06
BRCC3P46736 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
BRCC3P46736 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
BRCC3P46736 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.69□□□□□ -0.06
BRCC3P46736 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BRCC3P46736 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.69□□□□□ -0.06
BRCC3P46736 AC104581.4-201ENST00000623126 3052 ntBASIC14.69□□□□□ -0.06
BRCC3P46736 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms