Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
MDH1P40925 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
MDH1P40925 AL139158.3-201ENST00000641212 1562 ntBASIC13.98□□□□□ -0.17
MDH1P40925 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MDH1P40925 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
MDH1P40925 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MDH1P40925 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MDH1P40925 RPSAP43-201ENST00000402237 625 ntBASIC13.98□□□□□ -0.17
MDH1P40925 BX842568.4-201ENST00000421222 227 ntBASIC13.98□□□□□ -0.17
MDH1P40925 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.98□□□□□ -0.17
MDH1P40925 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC13.98□□□□□ -0.17
MDH1P40925 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.98□□□□□ -0.17
MDH1P40925 AC022137.2-201ENST00000503482 481 ntBASIC13.98□□□□□ -0.17
MDH1P40925 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.98□□□□□ -0.17
MDH1P40925 AC104794.3-201ENST00000566840 1248 ntBASIC13.98□□□□□ -0.17
MDH1P40925 CTBP2P3-201ENST00000585629 1255 ntBASIC13.98□□□□□ -0.17
MDH1P40925 AC010327.4-202ENST00000591484 748 ntBASIC13.98□□□□□ -0.17
MDH1P40925 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.98□□□□□ -0.17
MDH1P40925 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
MDH1P40925 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
MDH1P40925 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.98□□□□□ -0.17
MDH1P40925 Z92544.3-201ENST00000624747 417 ntBASIC13.98□□□□□ -0.17
MDH1P40925 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
MDH1P40925 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MDH1P40925 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MDH1P40925 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
MDH1P40925 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
MDH1P40925 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
MDH1P40925 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MDH1P40925 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
MDH1P40925 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
MDH1P40925 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MDH1P40925 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MDH1P40925 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
MDH1P40925 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MDH1P40925 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.98□□□□□ -0.17
MDH1P40925 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MDH1P40925 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MDH1P40925 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
MDH1P40925 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MDH1P40925 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MDH1P40925 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
MDH1P40925 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
MDH1P40925 UBTFL8-201ENST00000426903 2112 ntBASIC13.97□□□□□ -0.17
MDH1P40925 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
MDH1P40925 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC13.97□□□□□ -0.17
MDH1P40925 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
MDH1P40925 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC13.97□□□□□ -0.17
MDH1P40925 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 CSPG4P11-201ENST00000560634 4910 ntBASIC13.97□□□□□ -0.17
MDH1P40925 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC13.97□□□□□ -0.17
MDH1P40925 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 TNKS-213ENST00000522110 2900 ntBASIC13.97□□□□□ -0.17
MDH1P40925 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC13.97□□□□□ -0.17
MDH1P40925 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC13.97□□□□□ -0.17
MDH1P40925 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
MDH1P40925 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
MDH1P40925 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 UPF3AP3-201ENST00000420996 769 ntBASIC13.97□□□□□ -0.17
MDH1P40925 MEP1AP4-201ENST00000423244 1087 ntBASIC13.97□□□□□ -0.17
MDH1P40925 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.97□□□□□ -0.17
MDH1P40925 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.97□□□□□ -0.17
MDH1P40925 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.97□□□□□ -0.17
MDH1P40925 AC109322.1-201ENST00000524499 1264 ntBASIC13.97□□□□□ -0.17
MDH1P40925 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.97□□□□□ -0.17
MDH1P40925 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
MDH1P40925 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
MDH1P40925 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.97□□□□□ -0.17
MDH1P40925 AP001063.1-201ENST00000568332 529 ntBASIC13.97□□□□□ -0.17
MDH1P40925 RN7SL48P-201ENST00000579283 293 ntBASIC13.97□□□□□ -0.17
MDH1P40925 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.97□□□□□ -0.17
MDH1P40925 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 AL158211.3-201ENST00000607385 239 ntBASIC13.97□□□□□ -0.17
MDH1P40925 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.97□□□□□ -0.17
MDH1P40925 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC13.97□□□□□ -0.17
MDH1P40925 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 SEC31A-202ENST00000311785 3909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MDH1P40925 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms