Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.05□□□□□ -0.32
NR4A1P22736 MIR6752-201ENST00000618442 71 ntBASIC13.05□□□□□ -0.32
NR4A1P22736 AC138951.2-201ENST00000623455 1161 ntBASIC13.05□□□□□ -0.32
NR4A1P22736 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
NR4A1P22736 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
NR4A1P22736 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A1P22736 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC13.05□□□□□ -0.32
NR4A1P22736 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A1P22736 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A1P22736 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A1P22736 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A1P22736 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC13.05□□□□□ -0.32
NR4A1P22736 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A1P22736 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
NR4A1P22736 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
NR4A1P22736 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NR4A1P22736 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC13.05□□□□□ -0.32
NR4A1P22736 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A1P22736 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.05□□□□□ -0.32
NR4A1P22736 DDX12P-201ENST00000432996 2947 ntBASIC13.05□□□□□ -0.32
NR4A1P22736 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
NR4A1P22736 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NR4A1P22736 AL583810.2-201ENST00000556430 3254 ntBASIC13.05□□□□□ -0.32
NR4A1P22736 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.04□□□□□ -0.32
NR4A1P22736 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NR4A1P22736 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC13.04□□□□□ -0.32
NR4A1P22736 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NR4A1P22736 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
NR4A1P22736 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NR4A1P22736 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.04□□□□□ -0.32
NR4A1P22736 AC010536.1-201ENST00000538868 2611 ntBASIC13.04□□□□□ -0.32
NR4A1P22736 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NR4A1P22736 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.04□□□□□ -0.32
NR4A1P22736 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.04□□□□□ -0.32
NR4A1P22736 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.04□□□□□ -0.32
NR4A1P22736 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.04□□□□□ -0.32
NR4A1P22736 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.04□□□□□ -0.32
NR4A1P22736 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.04□□□□□ -0.32
NR4A1P22736 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.04□□□□□ -0.32
NR4A1P22736 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 AC078819.1-201ENST00000547454 765 ntBASIC13.04□□□□□ -0.32
NR4A1P22736 AC012085.1-201ENST00000548270 765 ntBASIC13.04□□□□□ -0.32
NR4A1P22736 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.04□□□□□ -0.32
NR4A1P22736 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.04□□□□□ -0.32
NR4A1P22736 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.04□□□□□ -0.32
NR4A1P22736 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.04□□□□□ -0.32
NR4A1P22736 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NR4A1P22736 BAP1-211ENST00000615113 489 ntBASIC13.04□□□□□ -0.32
NR4A1P22736 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.04□□□□□ -0.32
NR4A1P22736 AC006453.4-201ENST00000636949 1252 ntBASIC13.04□□□□□ -0.32
NR4A1P22736 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.04□□□□□ -0.32
NR4A1P22736 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NR4A1P22736 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NR4A1P22736 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.04□□□□□ -0.32
NR4A1P22736 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 LINC00638-201ENST00000555578 2518 ntBASIC13.04□□□□□ -0.32
NR4A1P22736 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NR4A1P22736 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NR4A1P22736 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A1P22736 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC13.03□□□□□ -0.32
NR4A1P22736 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A1P22736 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC13.03□□□□□ -0.32
NR4A1P22736 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A1P22736 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A1P22736 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A1P22736 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A1P22736 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.03□□□□□ -0.32
NR4A1P22736 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
NR4A1P22736 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC13.03□□□□□ -0.32
NR4A1P22736 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A1P22736 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A1P22736 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC13.03□□□□□ -0.32
NR4A1P22736 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A1P22736 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A1P22736 FAM90A11P-201ENST00000518378 2218 ntBASIC13.03□□□□□ -0.32
NR4A1P22736 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.03□□□□□ -0.32
NR4A1P22736 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A1P22736 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A1P22736 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A1P22736 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NR4A1P22736 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms