Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.12■□□□□ 0.17
ATP2B1P20020 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.12■□□□□ 0.17
ATP2B1P20020 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2B1P20020 AL021707.6-201ENST00000609212 491 ntBASIC16.12■□□□□ 0.17
ATP2B1P20020 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.12■□□□□ 0.17
ATP2B1P20020 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ATP2B1P20020 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.12■□□□□ 0.17
ATP2B1P20020 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2B1P20020 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2B1P20020 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC16.12■□□□□ 0.17
ATP2B1P20020 TUBB4AP1-201ENST00000450755 1325 ntBASIC16.12■□□□□ 0.17
ATP2B1P20020 AC008620.2-201ENST00000510294 1569 ntBASIC16.12■□□□□ 0.17
ATP2B1P20020 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ATP2B1P20020 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2B1P20020 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2B1P20020 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
ATP2B1P20020 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2B1P20020 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2B1P20020 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2B1P20020 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2B1P20020 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2B1P20020 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC16.12■□□□□ 0.17
ATP2B1P20020 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.12■□□□□ 0.17
ATP2B1P20020 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATP2B1P20020 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ATP2B1P20020 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ATP2B1P20020 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.11■□□□□ 0.17
ATP2B1P20020 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
ATP2B1P20020 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
ATP2B1P20020 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
ATP2B1P20020 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ATP2B1P20020 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 AC019294.4-201ENST00000561777 2905 ntBASIC16.11■□□□□ 0.17
ATP2B1P20020 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ATP2B1P20020 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.11■□□□□ 0.17
ATP2B1P20020 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.11■□□□□ 0.17
ATP2B1P20020 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
ATP2B1P20020 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.11■□□□□ 0.17
ATP2B1P20020 AC073150.1-201ENST00000450406 1084 ntBASIC16.11■□□□□ 0.17
ATP2B1P20020 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.11■□□□□ 0.17
ATP2B1P20020 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.11■□□□□ 0.17
ATP2B1P20020 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.11■□□□□ 0.17
ATP2B1P20020 ACTG1P17-201ENST00000558391 1119 ntBASIC16.11■□□□□ 0.17
ATP2B1P20020 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC16.11■□□□□ 0.17
ATP2B1P20020 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 TSN-212ENST00000536142 3328 ntTSL 2 BASIC16.11■□□□□ 0.17
ATP2B1P20020 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC16.11■□□□□ 0.17
ATP2B1P20020 LINC00567-201ENST00000569854 3409 ntBASIC16.11■□□□□ 0.17
ATP2B1P20020 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC16.11■□□□□ 0.17
ATP2B1P20020 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC16.11■□□□□ 0.17
ATP2B1P20020 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC16.11■□□□□ 0.17
ATP2B1P20020 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ATP2B1P20020 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ATP2B1P20020 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2B1P20020 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.11■□□□□ 0.17
ATP2B1P20020 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2B1P20020 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2B1P20020 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2B1P20020 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2B1P20020 TNN-202ENST00000621086 4234 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP2B1P20020 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2B1P20020 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP2B1P20020 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
ATP2B1P20020 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP2B1P20020 STRCP1-201ENST00000509801 5328 ntBASIC16.1■□□□□ 0.17
ATP2B1P20020 MIR193BHG-211ENST00000641433 5365 ntBASIC16.1■□□□□ 0.17
ATP2B1P20020 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP2B1P20020 FMO6P-201ENST00000236166 1620 ntBASIC16.1■□□□□ 0.17
ATP2B1P20020 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2B1P20020 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2B1P20020 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2B1P20020 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2B1P20020 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP2B1P20020 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.1■□□□□ 0.17
ATP2B1P20020 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ATP2B1P20020 AL596276.2-201ENST00000447525 331 ntBASIC16.1■□□□□ 0.17
ATP2B1P20020 AC005077.2-201ENST00000449786 690 ntBASIC16.1■□□□□ 0.17
ATP2B1P20020 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.1■□□□□ 0.17
ATP2B1P20020 KRT8P1-201ENST00000557533 1207 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms