Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.43■□□□□ 0.06
TPM1P09493 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TPM1P09493 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.43■□□□□ 0.06
TPM1P09493 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.43■□□□□ 0.06
TPM1P09493 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC15.43■□□□□ 0.06
TPM1P09493 AL139158.3-201ENST00000641212 1562 ntBASIC15.43■□□□□ 0.06
TPM1P09493 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TPM1P09493 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TPM1P09493 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TPM1P09493 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TPM1P09493 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TPM1P09493 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TPM1P09493 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TPM1P09493 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TPM1P09493 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TPM1P09493 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC15.43■□□□□ 0.06
TPM1P09493 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.43■□□□□ 0.06
TPM1P09493 MARK2P16-201ENST00000605714 1723 ntBASIC15.43■□□□□ 0.06
TPM1P09493 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TPM1P09493 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC15.43■□□□□ 0.06
TPM1P09493 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.43■□□□□ 0.06
TPM1P09493 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TPM1P09493 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM1P09493 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC15.42■□□□□ 0.06
TPM1P09493 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
TPM1P09493 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM1P09493 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.42■□□□□ 0.06
TPM1P09493 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM1P09493 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM1P09493 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM1P09493 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM1P09493 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TPM1P09493 MIR1202-201ENST00000408529 83 ntBASIC15.42■□□□□ 0.06
TPM1P09493 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.42■□□□□ 0.06
TPM1P09493 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.42■□□□□ 0.06
TPM1P09493 AC003958.1-201ENST00000435883 421 ntBASIC15.42■□□□□ 0.06
TPM1P09493 FTH1P14-201ENST00000482930 551 ntBASIC15.42■□□□□ 0.06
TPM1P09493 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.42■□□□□ 0.06
TPM1P09493 GOLGA2P8-201ENST00000505201 779 ntBASIC15.42■□□□□ 0.06
TPM1P09493 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TPM1P09493 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TPM1P09493 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.42■□□□□ 0.06
TPM1P09493 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.42■□□□□ 0.06
TPM1P09493 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM1P09493 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM1P09493 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM1P09493 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM1P09493 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM1P09493 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC15.42■□□□□ 0.06
TPM1P09493 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TPM1P09493 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC15.42■□□□□ 0.06
TPM1P09493 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM1P09493 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TPM1P09493 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC15.42■□□□□ 0.06
TPM1P09493 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TPM1P09493 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
TPM1P09493 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TPM1P09493 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TPM1P09493 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM1P09493 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TPM1P09493 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM1P09493 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TPM1P09493 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TPM1P09493 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM1P09493 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM1P09493 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TPM1P09493 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM1P09493 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM1P09493 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM1P09493 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM1P09493 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM1P09493 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM1P09493 AC098614.1-201ENST00000368528 745 ntBASIC15.41■□□□□ 0.06
TPM1P09493 AC236430.1-201ENST00000402231 743 ntBASIC15.41■□□□□ 0.06
TPM1P09493 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.41■□□□□ 0.06
TPM1P09493 CNN2P8-201ENST00000421872 913 ntBASIC15.41■□□□□ 0.06
TPM1P09493 FAM58BP-201ENST00000439056 645 ntBASIC15.41■□□□□ 0.06
TPM1P09493 AC002472.2-201ENST00000442739 958 ntBASIC15.41■□□□□ 0.06
TPM1P09493 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM1P09493 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM1P09493 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.41■□□□□ 0.06
TPM1P09493 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.41■□□□□ 0.06
TPM1P09493 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.41■□□□□ 0.06
TPM1P09493 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM1P09493 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.41■□□□□ 0.06
TPM1P09493 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TPM1P09493 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TPM1P09493 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM1P09493 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM1P09493 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TPM1P09493 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC15.41■□□□□ 0.06
TPM1P09493 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM1P09493 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TPM1P09493 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
TPM1P09493 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM1P09493 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TPM1P09493 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TPM1P09493 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC15.41■□□□□ 0.06
TPM1P09493 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC15.41■□□□□ 0.06
TPM1P09493 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms