Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC8.24□□□□□ -1.09
APOBP04114 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC8.24□□□□□ -1.09
APOBP04114 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 CDK7-202ENST00000502604 1455 ntTSL 5 BASIC8.24□□□□□ -1.09
APOBP04114 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
APOBP04114 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 TCTE1-201ENST00000371504 616 ntTSL 3 BASIC8.24□□□□□ -1.09
APOBP04114 OBP2A-203ENST00000371776 689 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
APOBP04114 AIMP2-203ENST00000400479 1107 ntTSL 5 BASIC8.24□□□□□ -1.09
APOBP04114 AC007405.2-203ENST00000455988 547 ntTSL 4 BASIC8.24□□□□□ -1.09
APOBP04114 DHRS7-202ENST00000536410 1194 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 AC103706.1-201ENST00000561761 679 ntBASIC8.24□□□□□ -1.09
APOBP04114 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC8.24□□□□□ -1.09
APOBP04114 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC8.24□□□□□ -1.09
APOBP04114 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC8.24□□□□□ -1.09
APOBP04114 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 RHPN1-AS1-201ENST00000518049 1918 ntBASIC8.24□□□□□ -1.09
APOBP04114 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 MPI-208ENST00000563786 1707 ntTSL 5 BASIC8.24□□□□□ -1.09
APOBP04114 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC8.24□□□□□ -1.09
APOBP04114 CACNA1G-AS1-202ENST00000505793 1433 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
APOBP04114 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC8.24□□□□□ -1.09
APOBP04114 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC8.24□□□□□ -1.09
APOBP04114 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 APTX-203ENST00000379813 1121 ntTSL 5 BASIC8.24□□□□□ -1.09
APOBP04114 RPL10P12-201ENST00000427342 318 ntBASIC8.24□□□□□ -1.09
APOBP04114 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 APTX-220ENST00000476858 1068 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 AC010601.1-201ENST00000569048 446 ntTSL 5 BASIC8.24□□□□□ -1.09
APOBP04114 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC8.24□□□□□ -1.09
APOBP04114 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC8.24□□□□□ -1.09
APOBP04114 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
APOBP04114 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 KRT36-201ENST00000328119 1644 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
APOBP04114 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
APOBP04114 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 AC135506.1-201ENST00000603877 1799 ntBASIC8.24□□□□□ -1.09
APOBP04114 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
APOBP04114 HAMP-201ENST00000222304 558 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC8.24□□□□□ -1.09
APOBP04114 FOLR1-201ENST00000312293 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 MED15P7-201ENST00000435410 822 ntBASIC8.24□□□□□ -1.09
APOBP04114 UCMA-202ENST00000463405 763 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
APOBP04114 RN7SL105P-201ENST00000475661 299 ntBASIC8.24□□□□□ -1.09
APOBP04114 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 BCRP5-201ENST00000514371 253 ntBASIC8.24□□□□□ -1.09
APOBP04114 SLC16A7-209ENST00000549465 537 ntTSL 3 BASIC8.24□□□□□ -1.09
APOBP04114 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC8.24□□□□□ -1.09
APOBP04114 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
APOBP04114 Z82244.1-201ENST00000631502 840 ntBASIC8.24□□□□□ -1.09
APOBP04114 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC8.23□□□□□ -1.09
APOBP04114 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
APOBP04114 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
APOBP04114 AC152010.1-201ENST00000415779 2006 ntBASIC8.23□□□□□ -1.09
APOBP04114 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC8.23□□□□□ -1.09
APOBP04114 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC8.23□□□□□ -1.09
APOBP04114 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC8.23□□□□□ -1.09
APOBP04114 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC8.23□□□□□ -1.09
APOBP04114 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
APOBP04114 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
APOBP04114 ANKRD26P3-201ENST00000454044 2748 ntBASIC8.23□□□□□ -1.09
APOBP04114 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC8.23□□□□□ -1.09
APOBP04114 OR4C6-201ENST00000314259 1020 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
APOBP04114 KHDC1L-201ENST00000370388 635 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
APOBP04114 ZNF451-205ENST00000370710 375 ntTSL 2 BASIC8.23□□□□□ -1.09
APOBP04114 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC8.23□□□□□ -1.09
APOBP04114 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC8.23□□□□□ -1.09
APOBP04114 RPSAP5-201ENST00000485258 884 ntBASIC8.23□□□□□ -1.09
APOBP04114 HNRNPA1P69-201ENST00000552536 933 ntBASIC8.23□□□□□ -1.09
APOBP04114 LINC00868-203ENST00000592919 853 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
APOBP04114 FXYD3-207ENST00000604255 780 ntTSL 5 BASIC8.23□□□□□ -1.09
APOBP04114 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
APOBP04114 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
APOBP04114 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
APOBP04114 LILRA2-204ENST00000391738 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
APOBP04114 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC8.23□□□□□ -1.09
APOBP04114 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
APOBP04114 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC8.23□□□□□ -1.09
APOBP04114 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
APOBP04114 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
APOBP04114 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
APOBP04114 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
APOBP04114 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
APOBP04114 AKTIP-201ENST00000300245 2133 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
APOBP04114 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
APOBP04114 RN7SKP245-201ENST00000364025 320 ntBASIC8.23□□□□□ -1.09
APOBP04114 AL354707.1-204ENST00000451142 846 ntTSL 2 BASIC8.23□□□□□ -1.09
APOBP04114 AC145285.1-201ENST00000469929 694 ntBASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms