Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
APOC3P02656 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 RAB17-203ENST00000409576 466 ntTSL 3 BASIC11.07□□□□□ -0.64
APOC3P02656 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.07□□□□□ -0.64
APOC3P02656 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 SLC25A6P4-201ENST00000586535 553 ntBASIC11.07□□□□□ -0.64
APOC3P02656 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.07□□□□□ -0.64
APOC3P02656 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.07□□□□□ -0.64
APOC3P02656 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC11.07□□□□□ -0.64
APOC3P02656 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC11.07□□□□□ -0.64
APOC3P02656 CDX2-201ENST00000381020 4053 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC11.07□□□□□ -0.64
APOC3P02656 UCP3-201ENST00000314032 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 TKTL1-202ENST00000369915 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC11.07□□□□□ -0.64
APOC3P02656 SLC10A1-201ENST00000216540 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 THUMPD1-201ENST00000381337 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 AC092117.2-201ENST00000623937 1659 ntBASIC11.07□□□□□ -0.64
APOC3P02656 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 ABCC8-201ENST00000302539 4923 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
APOC3P02656 IKZF1-210ENST00000439701 3572 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 PAX6-208ENST00000379132 2576 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
APOC3P02656 OR13A1-203ENST00000553795 2078 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
APOC3P02656 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC11.07□□□□□ -0.64
APOC3P02656 EPHA5-205ENST00000613740 8355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC11.07□□□□□ -0.64
APOC3P02656 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.07□□□□□ -0.64
APOC3P02656 TYK2-202ENST00000524462 3456 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 ANKMY1-201ENST00000272972 3228 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
APOC3P02656 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
APOC3P02656 PMEL-204ENST00000548493 2204 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
APOC3P02656 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC11.07□□□□□ -0.64
APOC3P02656 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 FGFR1-208ENST00000397108 2870 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC11.06□□□□□ -0.64
APOC3P02656 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
APOC3P02656 NMT1-213ENST00000592782 4999 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
APOC3P02656 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.06□□□□□ -0.64
APOC3P02656 ITGB6-204ENST00000409967 2292 ntTSL 3 BASIC11.06□□□□□ -0.64
APOC3P02656 RNF10-203ENST00000413266 2671 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
APOC3P02656 DLEU1-231ENST00000490577 2440 ntTSL 5 BASIC11.06□□□□□ -0.64
APOC3P02656 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
APOC3P02656 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 ZNF641-203ENST00000544117 7819 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 FUT6-203ENST00000524754 2598 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
APOC3P02656 LINC00668-204ENST00000580197 2343 ntTSL 2 BASIC11.06□□□□□ -0.64
APOC3P02656 AIF1L-207ENST00000372309 3515 ntTSL 2 BASIC11.06□□□□□ -0.64
APOC3P02656 LRRK2-202ENST00000343742 4740 ntTSL 5 BASIC11.06□□□□□ -0.64
APOC3P02656 MROH1-211ENST00000544576 3673 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 ELP4-212ENST00000638764 2456 ntTSL 5 BASIC11.06□□□□□ -0.64
APOC3P02656 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC11.06□□□□□ -0.64
APOC3P02656 BRD4-203ENST00000371835 4624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC11.06□□□□□ -0.64
APOC3P02656 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
APOC3P02656 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 MIR718-201ENST00000390190 70 ntBASIC11.06□□□□□ -0.64
APOC3P02656 RCN1P1-201ENST00000400413 996 ntBASIC11.06□□□□□ -0.64
APOC3P02656 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
APOC3P02656 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC11.06□□□□□ -0.64
APOC3P02656 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 GCSHP5-201ENST00000443090 522 ntBASIC11.06□□□□□ -0.64
APOC3P02656 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC11.06□□□□□ -0.64
APOC3P02656 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC11.06□□□□□ -0.64
APOC3P02656 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC11.06□□□□□ -0.64
APOC3P02656 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
APOC3P02656 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC11.06□□□□□ -0.64
APOC3P02656 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC11.06□□□□□ -0.64
APOC3P02656 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC11.06□□□□□ -0.64
APOC3P02656 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC11.06□□□□□ -0.64
APOC3P02656 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
APOC3P02656 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC11.06□□□□□ -0.64
APOC3P02656 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
APOC3P02656 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC11.06□□□□□ -0.64
APOC3P02656 AC139530.3-201ENST00000620344 690 ntBASIC11.06□□□□□ -0.64
APOC3P02656 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 ZNF202-201ENST00000336139 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 CDH5-201ENST00000341529 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 SYNPO2L-201ENST00000372873 4121 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 DCT-201ENST00000377028 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
APOC3P02656 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
APOC3P02656 EPB41L1-203ENST00000373941 2652 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
APOC3P02656 IRF5-208ENST00000473745 2282 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
APOC3P02656 DOCK10-201ENST00000258390 7260 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
APOC3P02656 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
APOC3P02656 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms