Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 TIFAB-201ENST00000537858 5923 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC11.03□□□□□ -0.64
IFNA1P01562 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 PXK-210ENST00000479241 2817 ntTSL 2 BASIC11.03□□□□□ -0.64
IFNA1P01562 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
IFNA1P01562 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
IFNA1P01562 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
IFNA1P01562 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
IFNA1P01562 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC11.02□□□□□ -0.64
IFNA1P01562 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
IFNA1P01562 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
IFNA1P01562 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
IFNA1P01562 DNAJB14-205ENST00000442697 6075 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
IFNA1P01562 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC11.02□□□□□ -0.64
IFNA1P01562 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
IFNA1P01562 IL9RP3-201ENST00000442856 1674 ntBASIC11.02□□□□□ -0.64
IFNA1P01562 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
IFNA1P01562 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
IFNA1P01562 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
IFNA1P01562 XRRA1-201ENST00000321448 4695 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
IFNA1P01562 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
IFNA1P01562 SEMA6D-201ENST00000316364 6099 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
IFNA1P01562 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.65
IFNA1P01562 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
IFNA1P01562 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
IFNA1P01562 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
IFNA1P01562 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC11.02□□□□□ -0.65
IFNA1P01562 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.02□□□□□ -0.65
IFNA1P01562 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.02□□□□□ -0.65
IFNA1P01562 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC11.02□□□□□ -0.65
IFNA1P01562 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC11.02□□□□□ -0.65
IFNA1P01562 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.02□□□□□ -0.65
IFNA1P01562 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.02□□□□□ -0.65
IFNA1P01562 AC004466.1-201ENST00000599515 1080 ntBASIC11.02□□□□□ -0.65
IFNA1P01562 AC021016.3-201ENST00000608367 477 ntBASIC11.02□□□□□ -0.65
IFNA1P01562 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
IFNA1P01562 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC11.02□□□□□ -0.65
IFNA1P01562 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC11.02□□□□□ -0.65
IFNA1P01562 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
IFNA1P01562 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
IFNA1P01562 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC11.02□□□□□ -0.65
IFNA1P01562 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
IFNA1P01562 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
IFNA1P01562 AP3S2-201ENST00000336418 5891 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
IFNA1P01562 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC11.02□□□□□ -0.65
IFNA1P01562 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
IFNA1P01562 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
IFNA1P01562 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
IFNA1P01562 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
IFNA1P01562 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
IFNA1P01562 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
IFNA1P01562 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.65
IFNA1P01562 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
IFNA1P01562 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
IFNA1P01562 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
IFNA1P01562 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
IFNA1P01562 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
IFNA1P01562 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
IFNA1P01562 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
IFNA1P01562 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
IFNA1P01562 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC11.02□□□□□ -0.65
IFNA1P01562 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC11.02□□□□□ -0.65
IFNA1P01562 POM121L4P-202ENST00000427789 1891 ntBASIC11.02□□□□□ -0.65
IFNA1P01562 AC020910.5-201ENST00000623668 1865 ntBASIC11.02□□□□□ -0.65
IFNA1P01562 ZZEF1-201ENST00000381638 11456 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
IFNA1P01562 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
IFNA1P01562 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC11.01□□□□□ -0.65
IFNA1P01562 RGS3-207ENST00000374140 4591 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
IFNA1P01562 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC11.01□□□□□ -0.65
IFNA1P01562 AL132642.2-201ENST00000623423 1998 ntBASIC11.01□□□□□ -0.65
IFNA1P01562 CDC42BPA-202ENST00000366764 10445 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC11.01□□□□□ -0.65
IFNA1P01562 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 MYH4-201ENST00000255381 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
IFNA1P01562 MIS18BP1-201ENST00000310806 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 AC011700.1-201ENST00000610409 2627 ntBASIC11.01□□□□□ -0.65
IFNA1P01562 KDM5D-202ENST00000382806 5134 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC11.01□□□□□ -0.65
IFNA1P01562 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
IFNA1P01562 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 ACTBP8-201ENST00000403258 1108 ntBASIC11.01□□□□□ -0.65
IFNA1P01562 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
IFNA1P01562 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
IFNA1P01562 AC023274.1-201ENST00000418278 595 ntBASIC11.01□□□□□ -0.65
IFNA1P01562 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC11.01□□□□□ -0.65
IFNA1P01562 MCCD1P2-201ENST00000423228 335 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms