Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 AC005252.3-201ENST00000623855 2258 ntBASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 SALL4P6-201ENST00000429385 1691 ntBASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 AC079781.5-202ENST00000641784 3743 ntBASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 SARS-202ENST00000369923 1882 ntTSL 5 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 Z69890.1-201ENST00000382990 339 ntBASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 RPL7P35-201ENST00000446943 740 ntBASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 RPL18AP3-201ENST00000462885 528 ntBASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 HERC2P11-201ENST00000562845 725 ntBASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 AC100756.2-201ENST00000569537 736 ntBASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 MIR5572-201ENST00000583188 137 ntBASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 AC005618.3-201ENST00000624928 458 ntBASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 KRT8P18-201ENST00000413425 1445 ntBASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 PPT1-213ENST00000641319 2388 ntBASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 KRT8P43-201ENST00000406052 1458 ntBASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.57■□□□□ 0.08
COL4A3BPQ9Y5P4 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 AGAP12P-201ENST00000585227 2359 ntBASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 AL391647.1-201ENST00000395664 511 ntBASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 SCARNA12-201ENST00000459155 270 ntBASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 OR5BD1P-201ENST00000532527 817 ntBASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 AC145285.5-201ENST00000562217 361 ntBASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 DNM1P30-201ENST00000563586 452 ntBASIC15.56■□□□□ 0.08
COL4A3BPQ9Y5P4 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms