Protein–RNA interactions for Protein: Q9Y2J2

EPB41L3, Band 4.1-like protein 3, humanhuman

Predicted RBP Predictions only

Length 1,087 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3Q9Y2J2 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
EPB41L3Q9Y2J2 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
EPB41L3Q9Y2J2 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
EPB41L3Q9Y2J2 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
EPB41L3Q9Y2J2 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
EPB41L3Q9Y2J2 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 ABCD1P2-201ENST00000429313 1601 ntBASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 ACTG1P3-201ENST00000431775 1114 ntBASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 CTBP2P3-201ENST00000585629 1255 ntBASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 AC005498.2-205ENST00000593218 784 ntBASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 AL132655.2-201ENST00000596276 594 ntBASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 WFDC1-204ENST00000613603 549 ntBASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
EPB41L3Q9Y2J2 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
EPB41L3Q9Y2J2 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
EPB41L3Q9Y2J2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
EPB41L3Q9Y2J2 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
EPB41L3Q9Y2J2 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
EPB41L3Q9Y2J2 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.08□□□□□ -0.15
EPB41L3Q9Y2J2 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.08□□□□□ -0.15
EPB41L3Q9Y2J2 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 INE1-201ENST00000456273 945 ntBASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 AC017007.3-201ENST00000479865 435 ntBASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.08□□□□□ -0.16
EPB41L3Q9Y2J2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms