Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 AKTIP-201ENST00000300245 2133 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 SPANXD-201ENST00000370515 682 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 ARF1P2-201ENST00000392493 538 ntBASIC12.51□□□□□ -0.41
CHD8Q9HCK8 AP001625.3-201ENST00000416179 449 ntTSL 2 BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 CNN2P9-201ENST00000417134 909 ntBASIC12.51□□□□□ -0.41
CHD8Q9HCK8 C2orf27AP2-201ENST00000438438 555 ntBASIC12.51□□□□□ -0.41
CHD8Q9HCK8 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 RN7SL521P-201ENST00000488398 297 ntBASIC12.51□□□□□ -0.41
CHD8Q9HCK8 AC113346.2-201ENST00000502684 457 ntTSL 5 BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 PTDSS1-206ENST00000522072 1112 ntTSL 2 BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 COPZ1-206ENST00000549043 1232 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 AC239859.4-201ENST00000582255 675 ntBASIC12.51□□□□□ -0.41
CHD8Q9HCK8 AC022392.1-201ENST00000609403 744 ntBASIC12.51□□□□□ -0.41
CHD8Q9HCK8 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC12.51□□□□□ -0.41
CHD8Q9HCK8 AL117379.1-201ENST00000619319 677 ntBASIC12.51□□□□□ -0.41
CHD8Q9HCK8 HIST1H2APS4-202ENST00000635537 681 ntBASIC12.51□□□□□ -0.41
CHD8Q9HCK8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 SCARB2-202ENST00000452464 1495 ntTSL 2 BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 AL606760.3-201ENST00000569869 3591 ntBASIC12.51□□□□□ -0.41
CHD8Q9HCK8 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 HFE-204ENST00000349999 1704 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CHD8Q9HCK8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 C1QTNF9B-201ENST00000382137 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 SNORA9B-201ENST00000384170 133 ntBASIC12.5□□□□□ -0.41
CHD8Q9HCK8 SYCP3-203ENST00000392927 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 ART2P-201ENST00000415521 822 ntBASIC12.5□□□□□ -0.41
CHD8Q9HCK8 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 DDX39B-201ENST00000376177 1529 ntTSL 5 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 AC073869.1-201ENST00000415574 2762 ntBASIC12.5□□□□□ -0.41
CHD8Q9HCK8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 NEK11-213ENST00000511262 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 SNORA50D-201ENST00000408059 134 ntBASIC12.5□□□□□ -0.41
CHD8Q9HCK8 AGAP13P-201ENST00000417888 363 ntBASIC12.5□□□□□ -0.41
CHD8Q9HCK8 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 AC091057.1-201ENST00000501830 970 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 TMEM253-206ENST00000556585 1236 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 SPATA8-AS1-202ENST00000560888 392 ntTSL 5 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 AC007032.1-201ENST00000609281 847 ntBASIC12.5□□□□□ -0.41
CHD8Q9HCK8 PRKN-210ENST00000612540 603 ntTSL 5 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 188.6 ms