Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 RN7SL713P-201ENST00000582127 302 ntBASIC12.43□□□□□ -0.42
RFT1Q96AA3 AC015936.2-201ENST00000593177 259 ntBASIC12.43□□□□□ -0.42
RFT1Q96AA3 AL022328.1-201ENST00000610050 478 ntBASIC12.43□□□□□ -0.42
RFT1Q96AA3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 AL136301.1-201ENST00000615830 422 ntBASIC12.43□□□□□ -0.42
RFT1Q96AA3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 AC025048.6-201ENST00000634326 1161 ntBASIC12.43□□□□□ -0.42
RFT1Q96AA3 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 AC010336.1-201ENST00000539278 4739 ntBASIC12.43□□□□□ -0.42
RFT1Q96AA3 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC12.43□□□□□ -0.42
RFT1Q96AA3 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RFT1Q96AA3 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 AC002350.2-201ENST00000623894 1828 ntBASIC12.42□□□□□ -0.42
RFT1Q96AA3 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 RN7SL692P-201ENST00000464677 288 ntBASIC12.42□□□□□ -0.42
RFT1Q96AA3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 AC233724.13-201ENST00000598383 410 ntBASIC12.42□□□□□ -0.42
RFT1Q96AA3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 PCDHB17P-202ENST00000623466 3066 ntBASIC12.42□□□□□ -0.42
RFT1Q96AA3 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
RFT1Q96AA3 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RFT1Q96AA3 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFT1Q96AA3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFT1Q96AA3 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RFT1Q96AA3 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFT1Q96AA3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFT1Q96AA3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.41□□□□□ -0.42
RFT1Q96AA3 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RFT1Q96AA3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RFT1Q96AA3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RFT1Q96AA3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms