Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 TCAF2P1-201ENST00000291129 2421 ntBASIC14.16□□□□□ -0.14
HLA-CQ95604 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-CQ95604 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HLA-CQ95604 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-CQ95604 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-CQ95604 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-CQ95604 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-CQ95604 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-CQ95604 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-CQ95604 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.16□□□□□ -0.14
HLA-CQ95604 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HLA-CQ95604 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HLA-CQ95604 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-CQ95604 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-CQ95604 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-CQ95604 AL391903.1-201ENST00000407513 365 ntBASIC14.16□□□□□ -0.14
HLA-CQ95604 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-CQ95604 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-CQ95604 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.16□□□□□ -0.14
HLA-CQ95604 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC14.16□□□□□ -0.14
HLA-CQ95604 RN7SL487P-201ENST00000468140 344 ntBASIC14.16□□□□□ -0.14
HLA-CQ95604 RN7SL646P-201ENST00000492969 297 ntBASIC14.16□□□□□ -0.14
HLA-CQ95604 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-CQ95604 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-CQ95604 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC14.16□□□□□ -0.14
HLA-CQ95604 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC14.16□□□□□ -0.14
HLA-CQ95604 MIR4459-201ENST00000581837 66 ntBASIC14.16□□□□□ -0.14
HLA-CQ95604 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-CQ95604 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-CQ95604 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HLA-CQ95604 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-CQ95604 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-CQ95604 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-CQ95604 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-CQ95604 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-CQ95604 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-CQ95604 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-CQ95604 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-CQ95604 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-CQ95604 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HLA-CQ95604 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-CQ95604 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-CQ95604 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-CQ95604 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
HLA-CQ95604 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-CQ95604 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HLA-CQ95604 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
HLA-CQ95604 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HLA-CQ95604 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.15□□□□□ -0.14
HLA-CQ95604 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-CQ95604 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-CQ95604 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-CQ95604 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-CQ95604 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HLA-CQ95604 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-CQ95604 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.15□□□□□ -0.14
HLA-CQ95604 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.15□□□□□ -0.14
HLA-CQ95604 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC14.15□□□□□ -0.14
HLA-CQ95604 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-CQ95604 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
HLA-CQ95604 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-CQ95604 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-CQ95604 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-CQ95604 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HLA-CQ95604 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-CQ95604 AL390039.1-201ENST00000399148 611 ntBASIC14.15□□□□□ -0.14
HLA-CQ95604 HMGN1P4-201ENST00000419500 290 ntBASIC14.15□□□□□ -0.14
HLA-CQ95604 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC14.15□□□□□ -0.14
HLA-CQ95604 AC138392.1-201ENST00000427577 921 ntBASIC14.15□□□□□ -0.14
HLA-CQ95604 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC14.15□□□□□ -0.14
HLA-CQ95604 RN7SL148P-201ENST00000467120 279 ntBASIC14.15□□□□□ -0.14
HLA-CQ95604 RN7SL340P-201ENST00000470792 296 ntBASIC14.15□□□□□ -0.14
HLA-CQ95604 RN7SL477P-201ENST00000488440 286 ntBASIC14.15□□□□□ -0.14
HLA-CQ95604 CXXC1P1-202ENST00000489409 1212 ntBASIC14.15□□□□□ -0.14
HLA-CQ95604 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC14.15□□□□□ -0.14
HLA-CQ95604 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC14.15□□□□□ -0.14
HLA-CQ95604 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC14.15□□□□□ -0.14
HLA-CQ95604 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC14.15□□□□□ -0.14
HLA-CQ95604 AP001793.2-201ENST00000580267 780 ntTSL 2 BASIC14.15□□□□□ -0.14
HLA-CQ95604 MIR4526-201ENST00000583168 87 ntBASIC14.15□□□□□ -0.14
HLA-CQ95604 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HLA-CQ95604 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-CQ95604 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC14.15□□□□□ -0.14
HLA-CQ95604 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC14.15□□□□□ -0.14
HLA-CQ95604 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-CQ95604 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HLA-CQ95604 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
HLA-CQ95604 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
HLA-CQ95604 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HLA-CQ95604 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.15□□□□□ -0.14
HLA-CQ95604 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-CQ95604 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-CQ95604 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.15□□□□□ -0.14
HLA-CQ95604 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-CQ95604 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HLA-CQ95604 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-CQ95604 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-CQ95604 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLA-CQ95604 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
HLA-CQ95604 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC14.15□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms