Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 AL591499.1-201ENST00000307155 1153 ntBASIC14.7□□□□□ -0.06
HERVK_113Q902F9 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 POP5-201ENST00000341039 913 ntTSL 2 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 BX088651.3-201ENST00000418155 352 ntBASIC14.7□□□□□ -0.06
HERVK_113Q902F9 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 AC005077.3-201ENST00000449614 213 ntBASIC14.7□□□□□ -0.06
HERVK_113Q902F9 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 AC104115.1-201ENST00000484005 623 ntBASIC14.7□□□□□ -0.06
HERVK_113Q902F9 KRT18P42-201ENST00000505048 1255 ntBASIC14.7□□□□□ -0.06
HERVK_113Q902F9 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 NAT9-219ENST00000582524 573 ntTSL 4 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 AC244097.1-201ENST00000621631 1216 ntBASIC14.7□□□□□ -0.06
HERVK_113Q902F9 SNORA50D-202ENST00000627561 132 ntBASIC14.7□□□□□ -0.06
HERVK_113Q902F9 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 DLX4-206ENST00000611342 1662 ntBASIC14.7□□□□□ -0.06
HERVK_113Q902F9 AC093462.1-201ENST00000621167 1683 ntBASIC14.7□□□□□ -0.06
HERVK_113Q902F9 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HERVK_113Q902F9 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 SNORA50D-201ENST00000408059 134 ntBASIC14.69□□□□□ -0.06
HERVK_113Q902F9 NOS2P3-201ENST00000411468 867 ntBASIC14.69□□□□□ -0.06
HERVK_113Q902F9 NOS2P2-201ENST00000426269 867 ntBASIC14.69□□□□□ -0.06
HERVK_113Q902F9 AC105443.1-201ENST00000433754 712 ntBASIC14.69□□□□□ -0.06
HERVK_113Q902F9 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 AL450346.2-201ENST00000495602 1024 ntBASIC14.69□□□□□ -0.06
HERVK_113Q902F9 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 AL109954.3-201ENST00000615088 558 ntBASIC14.69□□□□□ -0.06
HERVK_113Q902F9 AC134878.2-201ENST00000620700 1265 ntBASIC14.69□□□□□ -0.06
HERVK_113Q902F9 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 AC097474.1-201ENST00000506481 1371 ntBASIC14.69□□□□□ -0.06
HERVK_113Q902F9 AC099063.4-201ENST00000641099 1602 ntBASIC14.69□□□□□ -0.06
HERVK_113Q902F9 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HERVK_113Q902F9 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HERVK_113Q902F9 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms