Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BEST2Q8NFU1 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
BEST2Q8NFU1 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
BEST2Q8NFU1 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
BEST2Q8NFU1 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
BEST2Q8NFU1 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BEST2Q8NFU1 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.94□□□□□ -0.02
BEST2Q8NFU1 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.94□□□□□ -0.02
BEST2Q8NFU1 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
BEST2Q8NFU1 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
BEST2Q8NFU1 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 AL357563.1-201ENST00000404728 395 ntBASIC14.93□□□□□ -0.02
BEST2Q8NFU1 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 AL627389.1-201ENST00000413508 1182 ntBASIC14.93□□□□□ -0.02
BEST2Q8NFU1 AC073210.1-201ENST00000414799 232 ntBASIC14.93□□□□□ -0.02
BEST2Q8NFU1 ACTG1P19-201ENST00000418987 1116 ntBASIC14.93□□□□□ -0.02
BEST2Q8NFU1 AC012362.1-201ENST00000434906 739 ntBASIC14.93□□□□□ -0.02
BEST2Q8NFU1 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 AL132780.4-201ENST00000624870 1135 ntBASIC14.93□□□□□ -0.02
BEST2Q8NFU1 AC002044.2-201ENST00000624910 970 ntBASIC14.93□□□□□ -0.02
BEST2Q8NFU1 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 AC020763.3-201ENST00000625095 2904 ntBASIC14.93□□□□□ -0.02
BEST2Q8NFU1 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 AC040160.2-201ENST00000623816 1675 ntBASIC14.93□□□□□ -0.02
BEST2Q8NFU1 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BEST2Q8NFU1 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 RPL35P9-201ENST00000446059 350 ntBASIC14.92□□□□□ -0.02
BEST2Q8NFU1 AC006529.1-201ENST00000459978 637 ntBASIC14.92□□□□□ -0.02
BEST2Q8NFU1 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 NT5C-204ENST00000578337 582 ntTSL 2 BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 AC025183.3-201ENST00000623526 1482 ntBASIC14.92□□□□□ -0.02
BEST2Q8NFU1 AC023794.5-201ENST00000564380 2157 ntBASIC14.92□□□□□ -0.02
BEST2Q8NFU1 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.92□□□□□ -0.02
BEST2Q8NFU1 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms