Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 AC005562.1-201ENST00000583030 3219 ntBASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.56□□□□□ -0.08
TTC39BQ5VTQ0 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 MIR497HG-202ENST00000572453 3838 ntBASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 AC067931.2-201ENST00000623655 2003 ntBASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 FTLP1-201ENST00000449155 526 ntBASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 RN7SL81P-201ENST00000493781 261 ntBASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 SLC25A15P3-201ENST00000505530 290 ntBASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 AC079328.1-201ENST00000560358 952 ntBASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 AC005632.3-201ENST00000605544 308 ntBASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 AL021707.6-201ENST00000609212 491 ntBASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 AL365181.3-201ENST00000605886 3222 ntBASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 LINC02486-201ENST00000604157 3000 ntBASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.55□□□□□ -0.08
TTC39BQ5VTQ0 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 AL356585.2-201ENST00000625078 2396 ntBASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 AL928654.5-201ENST00000624831 2501 ntBASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 AL512306.1-201ENST00000432698 848 ntBASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 AC130709.1-201ENST00000484779 1212 ntBASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms