Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.16■□□□□ 0.18
CERKLQ49MI3 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CERKLQ49MI3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 GEMIN8P4-201ENST00000380526 729 ntBASIC16.15■□□□□ 0.18
CERKLQ49MI3 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 DNM1P51-201ENST00000558149 522 ntBASIC16.15■□□□□ 0.18
CERKLQ49MI3 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 TYMSP2-201ENST00000589501 424 ntBASIC16.15■□□□□ 0.18
CERKLQ49MI3 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 ETV2-207ENST00000619399 994 ntTSL 5 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 RARS-210ENST00000626454 177 ntTSL 5 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.15■□□□□ 0.18
CERKLQ49MI3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CERKLQ49MI3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CERKLQ49MI3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.14■□□□□ 0.17
CERKLQ49MI3 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CERKLQ49MI3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CERKLQ49MI3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
CERKLQ49MI3 KRT8P24-201ENST00000560290 1559 ntBASIC16.14■□□□□ 0.17
CERKLQ49MI3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CERKLQ49MI3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CERKLQ49MI3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CERKLQ49MI3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CERKLQ49MI3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CERKLQ49MI3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC16.14■□□□□ 0.17
CERKLQ49MI3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CERKLQ49MI3 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CERKLQ49MI3 PIFO-201ENST00000369737 746 ntTSL 2 BASIC16.14■□□□□ 0.17
CERKLQ49MI3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CERKLQ49MI3 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.14■□□□□ 0.17
CERKLQ49MI3 IDS-203ENST00000428056 1213 ntTSL 2 BASIC16.14■□□□□ 0.17
CERKLQ49MI3 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC16.14■□□□□ 0.17
CERKLQ49MI3 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.14■□□□□ 0.17
CERKLQ49MI3 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC16.14■□□□□ 0.17
CERKLQ49MI3 PPOX-204ENST00000462866 473 ntTSL 5 BASIC16.14■□□□□ 0.17
CERKLQ49MI3 RN7SL288P-201ENST00000490496 291 ntBASIC16.14■□□□□ 0.17
CERKLQ49MI3 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC16.14■□□□□ 0.17
CERKLQ49MI3 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC16.14■□□□□ 0.17
CERKLQ49MI3 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CERKLQ49MI3 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC16.14■□□□□ 0.17
CERKLQ49MI3 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC16.14■□□□□ 0.17
CERKLQ49MI3 AC111170.3-201ENST00000624282 2464 ntBASIC16.14■□□□□ 0.17
CERKLQ49MI3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CERKLQ49MI3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CERKLQ49MI3 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CERKLQ49MI3 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC16.14■□□□□ 0.17
CERKLQ49MI3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.14■□□□□ 0.17
CERKLQ49MI3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CERKLQ49MI3 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CERKLQ49MI3 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CERKLQ49MI3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CERKLQ49MI3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CERKLQ49MI3 AGAP10P-201ENST00000454844 2418 ntBASIC16.14■□□□□ 0.17
CERKLQ49MI3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms