Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
IRX3P78415 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IRX3P78415 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IRX3P78415 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
IRX3P78415 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC16.3■□□□□ 0.2
IRX3P78415 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
IRX3P78415 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IRX3P78415 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
IRX3P78415 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
IRX3P78415 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IRX3P78415 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
IRX3P78415 TBC1D27-202ENST00000424239 1573 ntBASIC16.3■□□□□ 0.2
IRX3P78415 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
IRX3P78415 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IRX3P78415 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IRX3P78415 KRT8P43-201ENST00000406052 1458 ntBASIC16.29■□□□□ 0.2
IRX3P78415 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IRX3P78415 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
IRX3P78415 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC16.29■□□□□ 0.2
IRX3P78415 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IRX3P78415 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IRX3P78415 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC16.29■□□□□ 0.2
IRX3P78415 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IRX3P78415 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IRX3P78415 AOC4P-203ENST00000566825 2289 ntBASIC16.29■□□□□ 0.2
IRX3P78415 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
IRX3P78415 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IRX3P78415 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IRX3P78415 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IRX3P78415 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
IRX3P78415 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IRX3P78415 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
IRX3P78415 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.29■□□□□ 0.2
IRX3P78415 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
IRX3P78415 AC103592.1-201ENST00000394513 664 ntBASIC16.29■□□□□ 0.2
IRX3P78415 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC16.29■□□□□ 0.2
IRX3P78415 KRT18P62-201ENST00000446618 1287 ntBASIC16.29■□□□□ 0.2
IRX3P78415 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC16.29■□□□□ 0.2
IRX3P78415 ALG1L3P-201ENST00000503331 765 ntBASIC16.29■□□□□ 0.2
IRX3P78415 GOLGA2P8-201ENST00000505201 779 ntBASIC16.29■□□□□ 0.2
IRX3P78415 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC16.29■□□□□ 0.2
IRX3P78415 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC16.29■□□□□ 0.2
IRX3P78415 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC16.29■□□□□ 0.2
IRX3P78415 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
IRX3P78415 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
IRX3P78415 FOXN3-AS2-201ENST00000554071 1262 ntBASIC16.29■□□□□ 0.2
IRX3P78415 BATF-202ENST00000555504 361 ntTSL 2 BASIC16.29■□□□□ 0.2
IRX3P78415 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IRX3P78415 AC132825.4-202ENST00000578792 434 ntBASIC16.29■□□□□ 0.2
IRX3P78415 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
IRX3P78415 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
IRX3P78415 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.29■□□□□ 0.2
IRX3P78415 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IRX3P78415 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
IRX3P78415 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IRX3P78415 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IRX3P78415 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.29■□□□□ 0.2
IRX3P78415 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC16.29■□□□□ 0.2
IRX3P78415 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IRX3P78415 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IRX3P78415 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC16.29■□□□□ 0.2
IRX3P78415 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IRX3P78415 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IRX3P78415 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IRX3P78415 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 AC138761.6-201ENST00000583997 1423 ntBASIC16.28■□□□□ 0.2
IRX3P78415 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.28■□□□□ 0.2
IRX3P78415 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 AL109809.1-201ENST00000418979 1367 ntBASIC16.28■□□□□ 0.2
IRX3P78415 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC16.28■□□□□ 0.2
IRX3P78415 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.28■□□□□ 0.2
IRX3P78415 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.28■□□□□ 0.2
IRX3P78415 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
IRX3P78415 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.28■□□□□ 0.2
IRX3P78415 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC16.28■□□□□ 0.2
IRX3P78415 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 FAM86KP-201ENST00000509817 987 ntBASIC16.28■□□□□ 0.2
IRX3P78415 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC16.28■□□□□ 0.2
IRX3P78415 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC16.28■□□□□ 0.2
IRX3P78415 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC16.28■□□□□ 0.2
IRX3P78415 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
IRX3P78415 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms