Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 AC137723.2-201ENST00000623540 398 ntBASIC16.21■□□□□ 0.19
CNTNAP1P78357 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNTNAP1P78357 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNTNAP1P78357 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.21■□□□□ 0.19
CNTNAP1P78357 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.21■□□□□ 0.19
CNTNAP1P78357 AF013593.1-201ENST00000458074 1487 ntBASIC16.21■□□□□ 0.19
CNTNAP1P78357 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
CNTNAP1P78357 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CNTNAP1P78357 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CNTNAP1P78357 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.21■□□□□ 0.18
CNTNAP1P78357 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CNTNAP1P78357 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CNTNAP1P78357 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC16.2■□□□□ 0.18
CNTNAP1P78357 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNTNAP1P78357 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.2■□□□□ 0.18
CNTNAP1P78357 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNTNAP1P78357 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNTNAP1P78357 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
CNTNAP1P78357 AC124944.3-201ENST00000607976 1304 ntBASIC16.2■□□□□ 0.18
CNTNAP1P78357 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNTNAP1P78357 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC16.2■□□□□ 0.18
CNTNAP1P78357 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CNTNAP1P78357 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNTNAP1P78357 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
CNTNAP1P78357 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNTNAP1P78357 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNTNAP1P78357 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNTNAP1P78357 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC16.2■□□□□ 0.18
CNTNAP1P78357 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CNTNAP1P78357 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC16.2■□□□□ 0.18
CNTNAP1P78357 RN7SL677P-201ENST00000466970 319 ntBASIC16.2■□□□□ 0.18
CNTNAP1P78357 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC16.2■□□□□ 0.18
CNTNAP1P78357 RPL30-213ENST00000523172 274 ntTSL 5 BASIC16.2■□□□□ 0.18
CNTNAP1P78357 RN7SL134P-201ENST00000579756 303 ntBASIC16.2■□□□□ 0.18
CNTNAP1P78357 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC16.2■□□□□ 0.18
CNTNAP1P78357 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC16.2■□□□□ 0.18
CNTNAP1P78357 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNTNAP1P78357 SFPQP1-201ENST00000446621 1786 ntBASIC16.2■□□□□ 0.18
CNTNAP1P78357 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC16.2■□□□□ 0.18
CNTNAP1P78357 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNTNAP1P78357 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNTNAP1P78357 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNTNAP1P78357 MST1P2-201ENST00000457982 2291 ntBASIC16.2■□□□□ 0.18
CNTNAP1P78357 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CNTNAP1P78357 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNTNAP1P78357 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CNTNAP1P78357 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNTNAP1P78357 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNTNAP1P78357 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNTNAP1P78357 STK16-202ENST00000409260 1493 ntTSL 5 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNTNAP1P78357 AP002414.2-201ENST00000591780 3365 ntBASIC16.19■□□□□ 0.18
CNTNAP1P78357 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNTNAP1P78357 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNTNAP1P78357 CD37-203ENST00000426897 1204 ntTSL 2 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 FAM213AP2-201ENST00000521579 683 ntBASIC16.19■□□□□ 0.18
CNTNAP1P78357 RPL10P8-201ENST00000522888 313 ntBASIC16.19■□□□□ 0.18
CNTNAP1P78357 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 ALG10-202ENST00000538927 571 ntTSL 5 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 KRT127P-201ENST00000547183 433 ntBASIC16.19■□□□□ 0.18
CNTNAP1P78357 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 AC133555.4-201ENST00000569081 152 ntBASIC16.19■□□□□ 0.18
CNTNAP1P78357 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC16.19■□□□□ 0.18
CNTNAP1P78357 AC010335.3-201ENST00000623767 531 ntBASIC16.19■□□□□ 0.18
CNTNAP1P78357 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 AC245140.2-201ENST00000624054 1939 ntBASIC16.19■□□□□ 0.18
CNTNAP1P78357 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNTNAP1P78357 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNTNAP1P78357 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNTNAP1P78357 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNTNAP1P78357 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNTNAP1P78357 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNTNAP1P78357 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 TCAM1P-207ENST00000485295 1537 ntBASIC16.19■□□□□ 0.18
CNTNAP1P78357 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNTNAP1P78357 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNTNAP1P78357 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNTNAP1P78357 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNTNAP1P78357 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNTNAP1P78357 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CNTNAP1P78357 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNTNAP1P78357 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNTNAP1P78357 PTN-202ENST00000393083 1599 ntTSL 5 BASIC16.18■□□□□ 0.18
CNTNAP1P78357 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms