Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CLDN20P56880 KRT17P5-201ENST00000332088 839 ntBASIC12.84□□□□□ -0.35
CLDN20P56880 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
CLDN20P56880 USP17L6P-201ENST00000382470 1197 ntBASIC12.84□□□□□ -0.35
CLDN20P56880 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.84□□□□□ -0.35
CLDN20P56880 OR8T1P-201ENST00000421347 918 ntBASIC12.84□□□□□ -0.35
CLDN20P56880 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.84□□□□□ -0.35
CLDN20P56880 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.84□□□□□ -0.35
CLDN20P56880 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 RPSAP15-201ENST00000448168 861 ntBASIC12.84□□□□□ -0.35
CLDN20P56880 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC12.84□□□□□ -0.35
CLDN20P56880 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.84□□□□□ -0.35
CLDN20P56880 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.84□□□□□ -0.35
CLDN20P56880 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 AL512310.5-201ENST00000551999 515 ntBASIC12.84□□□□□ -0.35
CLDN20P56880 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.84□□□□□ -0.35
CLDN20P56880 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.84□□□□□ -0.35
CLDN20P56880 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
CLDN20P56880 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.84□□□□□ -0.35
CLDN20P56880 AL133499.1-201ENST00000596207 608 ntBASIC12.84□□□□□ -0.35
CLDN20P56880 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.84□□□□□ -0.35
CLDN20P56880 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.84□□□□□ -0.35
CLDN20P56880 AC007718.1-201ENST00000621078 280 ntBASIC12.84□□□□□ -0.35
CLDN20P56880 AC068587.10-201ENST00000641210 219 ntBASIC12.84□□□□□ -0.35
CLDN20P56880 LINC01815-202ENST00000641468 1409 ntBASIC12.84□□□□□ -0.35
CLDN20P56880 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.84□□□□□ -0.35
CLDN20P56880 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CLDN20P56880 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CLDN20P56880 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.84□□□□□ -0.35
CLDN20P56880 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CLDN20P56880 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CLDN20P56880 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 AC004899.2-201ENST00000622993 3860 ntBASIC12.84□□□□□ -0.35
CLDN20P56880 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
CLDN20P56880 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
CLDN20P56880 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CLDN20P56880 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CLDN20P56880 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
CLDN20P56880 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CLDN20P56880 CAP2P1-201ENST00000557743 1390 ntBASIC12.83□□□□□ -0.36
CLDN20P56880 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.83□□□□□ -0.36
CLDN20P56880 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.83□□□□□ -0.36
CLDN20P56880 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CLDN20P56880 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.83□□□□□ -0.36
CLDN20P56880 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CLDN20P56880 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.83□□□□□ -0.36
CLDN20P56880 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.83□□□□□ -0.36
CLDN20P56880 RPL8P2-201ENST00000430538 502 ntBASIC12.83□□□□□ -0.36
CLDN20P56880 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 IGLV3-15-201ENST00000518356 244 ntBASIC12.83□□□□□ -0.36
CLDN20P56880 ALG1L13P-202ENST00000519320 584 ntBASIC12.83□□□□□ -0.36
CLDN20P56880 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.83□□□□□ -0.36
CLDN20P56880 RHOQP1-201ENST00000555758 579 ntBASIC12.83□□□□□ -0.36
CLDN20P56880 KRT8P1-201ENST00000557533 1207 ntBASIC12.83□□□□□ -0.36
CLDN20P56880 AL606495.2-201ENST00000605867 535 ntBASIC12.83□□□□□ -0.36
CLDN20P56880 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.83□□□□□ -0.36
CLDN20P56880 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.83□□□□□ -0.36
CLDN20P56880 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CLDN20P56880 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CLDN20P56880 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.83□□□□□ -0.36
CLDN20P56880 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
CLDN20P56880 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 AC135782.3-201ENST00000562782 2105 ntBASIC12.83□□□□□ -0.36
CLDN20P56880 MKRN5P-201ENST00000445263 1467 ntBASIC12.83□□□□□ -0.36
CLDN20P56880 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CLDN20P56880 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CLDN20P56880 KRT18P9-201ENST00000604826 1300 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms