Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12.57□□□□□ -0.4
SUMO3P55854 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.57□□□□□ -0.4
SUMO3P55854 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.57□□□□□ -0.4
SUMO3P55854 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SUMO3P55854 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SUMO3P55854 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SUMO3P55854 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SUMO3P55854 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.57□□□□□ -0.4
SUMO3P55854 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.57□□□□□ -0.4
SUMO3P55854 AL031713.1-201ENST00000564813 661 ntBASIC12.57□□□□□ -0.4
SUMO3P55854 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.57□□□□□ -0.4
SUMO3P55854 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
SUMO3P55854 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.57□□□□□ -0.4
SUMO3P55854 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SUMO3P55854 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SUMO3P55854 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SUMO3P55854 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.57□□□□□ -0.4
SUMO3P55854 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SUMO3P55854 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
SUMO3P55854 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SUMO3P55854 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SUMO3P55854 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.56□□□□□ -0.4
SUMO3P55854 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.56□□□□□ -0.4
SUMO3P55854 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SUMO3P55854 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.56□□□□□ -0.4
SUMO3P55854 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC12.56□□□□□ -0.4
SUMO3P55854 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SUMO3P55854 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.56□□□□□ -0.4
SUMO3P55854 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.56□□□□□ -0.4
SUMO3P55854 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SUMO3P55854 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.56□□□□□ -0.4
SUMO3P55854 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.56□□□□□ -0.4
SUMO3P55854 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.56□□□□□ -0.4
SUMO3P55854 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC12.56□□□□□ -0.4
SUMO3P55854 EEF1DP6-201ENST00000449232 372 ntBASIC12.56□□□□□ -0.4
SUMO3P55854 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.56□□□□□ -0.4
SUMO3P55854 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.56□□□□□ -0.4
SUMO3P55854 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 HINT1-205ENST00000508488 703 ntTSL 2 BASIC12.56□□□□□ -0.4
SUMO3P55854 AC093300.1-201ENST00000510368 1201 ntBASIC12.56□□□□□ -0.4
SUMO3P55854 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.56□□□□□ -0.4
SUMO3P55854 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC12.56□□□□□ -0.4
SUMO3P55854 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.56□□□□□ -0.4
SUMO3P55854 HERC2P11-201ENST00000562845 725 ntBASIC12.56□□□□□ -0.4
SUMO3P55854 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC12.56□□□□□ -0.4
SUMO3P55854 AC100756.2-201ENST00000569537 736 ntBASIC12.56□□□□□ -0.4
SUMO3P55854 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.56□□□□□ -0.4
SUMO3P55854 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.56□□□□□ -0.4
SUMO3P55854 AP000322.3-201ENST00000608665 388 ntBASIC12.56□□□□□ -0.4
SUMO3P55854 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC12.56□□□□□ -0.4
SUMO3P55854 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.56□□□□□ -0.4
SUMO3P55854 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 AL513497.1-201ENST00000624273 2083 ntBASIC12.56□□□□□ -0.4
SUMO3P55854 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.56□□□□□ -0.4
SUMO3P55854 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SUMO3P55854 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.56□□□□□ -0.4
SUMO3P55854 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms