Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 AC005077.3-201ENST00000449614 213 ntBASIC15.17■□□□□ 0.02
NCKAP1LP55160 RNA5SP406-201ENST00000516106 112 ntBASIC15.17■□□□□ 0.02
NCKAP1LP55160 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 NT5C-204ENST00000578337 582 ntTSL 2 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 RN7SL470P-201ENST00000583069 259 ntBASIC15.17■□□□□ 0.02
NCKAP1LP55160 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC15.16■□□□□ 0.02
NCKAP1LP55160 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC15.16■□□□□ 0.02
NCKAP1LP55160 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
NCKAP1LP55160 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC15.16■□□□□ 0.02
NCKAP1LP55160 AC004623.1-201ENST00000624592 2127 ntBASIC15.16■□□□□ 0.02
NCKAP1LP55160 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC15.16■□□□□ 0.02
NCKAP1LP55160 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.16■□□□□ 0.02
NCKAP1LP55160 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.16■□□□□ 0.02
NCKAP1LP55160 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC15.16■□□□□ 0.02
NCKAP1LP55160 Z69890.1-201ENST00000382990 339 ntBASIC15.16■□□□□ 0.02
NCKAP1LP55160 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
NCKAP1LP55160 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC15.16■□□□□ 0.02
NCKAP1LP55160 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC15.16■□□□□ 0.02
NCKAP1LP55160 EEF1GP8-201ENST00000506566 1154 ntBASIC15.16■□□□□ 0.02
NCKAP1LP55160 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC15.16■□□□□ 0.02
NCKAP1LP55160 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 AC135983.4-201ENST00000564116 1262 ntBASIC15.16■□□□□ 0.02
NCKAP1LP55160 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC15.16■□□□□ 0.02
NCKAP1LP55160 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.16■□□□□ 0.02
NCKAP1LP55160 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NCKAP1LP55160 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.16■□□□□ 0.02
NCKAP1LP55160 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1LP55160 ERG-211ENST00000453032 1595 ntTSL 2 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NCKAP1LP55160 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
NCKAP1LP55160 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms