Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.01□□□□□ -0.33
EFNA3P52797 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC13.01□□□□□ -0.33
EFNA3P52797 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 NRADDP-202ENST00000641269 1585 ntBASIC13.01□□□□□ -0.33
EFNA3P52797 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 SALL4P6-201ENST00000429385 1691 ntBASIC13.01□□□□□ -0.33
EFNA3P52797 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNA3P52797 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNA3P52797 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNA3P52797 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNA3P52797 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
EFNA3P52797 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
EFNA3P52797 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
EFNA3P52797 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNA3P52797 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNA3P52797 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNA3P52797 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.01□□□□□ -0.33
EFNA3P52797 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
EFNA3P52797 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
EFNA3P52797 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
EFNA3P52797 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13□□□□□ -0.33
EFNA3P52797 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13□□□□□ -0.33
EFNA3P52797 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13□□□□□ -0.33
EFNA3P52797 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
EFNA3P52797 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13□□□□□ -0.33
EFNA3P52797 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC13□□□□□ -0.33
EFNA3P52797 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
EFNA3P52797 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC13□□□□□ -0.33
EFNA3P52797 GGTLC4P-201ENST00000402176 664 ntBASIC13□□□□□ -0.33
EFNA3P52797 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC13□□□□□ -0.33
EFNA3P52797 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
EFNA3P52797 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC13□□□□□ -0.33
EFNA3P52797 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13□□□□□ -0.33
EFNA3P52797 AC092638.2-201ENST00000441105 947 ntBASIC13□□□□□ -0.33
EFNA3P52797 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC13□□□□□ -0.33
EFNA3P52797 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC13□□□□□ -0.33
EFNA3P52797 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC13□□□□□ -0.33
EFNA3P52797 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC13□□□□□ -0.33
EFNA3P52797 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC13□□□□□ -0.33
EFNA3P52797 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC13□□□□□ -0.33
EFNA3P52797 AL359091.4-201ENST00000610052 409 ntBASIC13□□□□□ -0.33
EFNA3P52797 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13□□□□□ -0.33
EFNA3P52797 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
EFNA3P52797 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13□□□□□ -0.33
EFNA3P52797 STX3-207ENST00000633708 3111 ntTSL 5 BASIC13□□□□□ -0.33
EFNA3P52797 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
EFNA3P52797 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13□□□□□ -0.33
EFNA3P52797 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
EFNA3P52797 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
EFNA3P52797 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
EFNA3P52797 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13□□□□□ -0.33
EFNA3P52797 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
EFNA3P52797 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
EFNA3P52797 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
EFNA3P52797 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.99□□□□□ -0.33
EFNA3P52797 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
EFNA3P52797 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
EFNA3P52797 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
EFNA3P52797 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
EFNA3P52797 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
EFNA3P52797 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
EFNA3P52797 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.99□□□□□ -0.33
EFNA3P52797 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
EFNA3P52797 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
EFNA3P52797 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
EFNA3P52797 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
EFNA3P52797 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
EFNA3P52797 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
EFNA3P52797 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
EFNA3P52797 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms