Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.23□□□□□ -0.29
CLK1P49759 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CLK1P49759 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLK1P49759 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLK1P49759 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.23□□□□□ -0.29
CLK1P49759 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.23□□□□□ -0.29
CLK1P49759 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.23□□□□□ -0.29
CLK1P49759 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLK1P49759 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.23□□□□□ -0.29
CLK1P49759 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.23□□□□□ -0.29
CLK1P49759 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CLK1P49759 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.23□□□□□ -0.29
CLK1P49759 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.23□□□□□ -0.29
CLK1P49759 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.23□□□□□ -0.29
CLK1P49759 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.23□□□□□ -0.29
CLK1P49759 AC132192.2-201ENST00000596206 1147 ntBASIC13.23□□□□□ -0.29
CLK1P49759 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.23□□□□□ -0.29
CLK1P49759 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC13.23□□□□□ -0.29
CLK1P49759 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLK1P49759 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLK1P49759 CICP1-201ENST00000416803 2410 ntBASIC13.23□□□□□ -0.29
CLK1P49759 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLK1P49759 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLK1P49759 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.23□□□□□ -0.29
CLK1P49759 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CLK1P49759 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CLK1P49759 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CLK1P49759 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CLK1P49759 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC13.23□□□□□ -0.29
CLK1P49759 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLK1P49759 AC024075.2-201ENST00000598112 1473 ntBASIC13.23□□□□□ -0.29
CLK1P49759 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CLK1P49759 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.23□□□□□ -0.29
CLK1P49759 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CLK1P49759 CICP7-201ENST00000432723 2477 ntBASIC13.22□□□□□ -0.29
CLK1P49759 AC125807.2-201ENST00000513358 3514 ntBASIC13.22□□□□□ -0.29
CLK1P49759 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.22□□□□□ -0.29
CLK1P49759 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CLK1P49759 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CLK1P49759 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CLK1P49759 AC027020.2-201ENST00000602585 2389 ntBASIC13.22□□□□□ -0.29
CLK1P49759 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 AC090114.2-201ENST00000608477 7054 ntBASIC13.22□□□□□ -0.29
CLK1P49759 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CLK1P49759 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.22□□□□□ -0.29
CLK1P49759 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC13.22□□□□□ -0.29
CLK1P49759 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC13.22□□□□□ -0.29
CLK1P49759 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.22□□□□□ -0.29
CLK1P49759 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.22□□□□□ -0.29
CLK1P49759 AL354877.1-201ENST00000424412 413 ntBASIC13.22□□□□□ -0.29
CLK1P49759 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.22□□□□□ -0.29
CLK1P49759 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.22□□□□□ -0.29
CLK1P49759 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CLK1P49759 AC012441.2-201ENST00000444843 739 ntBASIC13.22□□□□□ -0.29
CLK1P49759 Z93015.1-201ENST00000451718 390 ntBASIC13.22□□□□□ -0.29
CLK1P49759 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.22□□□□□ -0.29
CLK1P49759 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.22□□□□□ -0.29
CLK1P49759 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.22□□□□□ -0.29
CLK1P49759 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.22□□□□□ -0.29
CLK1P49759 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.22□□□□□ -0.29
CLK1P49759 AC009955.4-201ENST00000597192 544 ntBASIC13.22□□□□□ -0.29
CLK1P49759 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.22□□□□□ -0.29
CLK1P49759 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.22□□□□□ -0.29
CLK1P49759 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.22□□□□□ -0.29
CLK1P49759 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.22□□□□□ -0.29
CLK1P49759 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.22□□□□□ -0.29
CLK1P49759 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 AC022400.8-201ENST00000623453 3599 ntBASIC13.22□□□□□ -0.29
CLK1P49759 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.22□□□□□ -0.29
CLK1P49759 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.22□□□□□ -0.29
CLK1P49759 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CLK1P49759 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CLK1P49759 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CLK1P49759 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CLK1P49759 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.22□□□□□ -0.29
CLK1P49759 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CLK1P49759 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.22□□□□□ -0.29
CLK1P49759 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms