Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.55□□□□□ -0.4
ATRXP46100 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 CACNA1G-AS1-202ENST00000505793 1433 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.55□□□□□ -0.4
ATRXP46100 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 LINC00271-202ENST00000436554 655 ntTSL 5 BASIC12.55□□□□□ -0.4
ATRXP46100 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC12.55□□□□□ -0.4
ATRXP46100 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 AC091564.7-201ENST00000545572 464 ntTSL 3 BASIC12.55□□□□□ -0.4
ATRXP46100 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC12.55□□□□□ -0.4
ATRXP46100 B9D1-213ENST00000575403 928 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 KRT16P1-202ENST00000577750 679 ntTSL 3 BASIC12.55□□□□□ -0.4
ATRXP46100 CCND3P2-201ENST00000579393 537 ntBASIC12.55□□□□□ -0.4
ATRXP46100 AL078624.1-201ENST00000604004 547 ntBASIC12.55□□□□□ -0.4
ATRXP46100 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC12.55□□□□□ -0.4
ATRXP46100 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC12.55□□□□□ -0.4
ATRXP46100 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
ATRXP46100 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 DOC2GP-204ENST00000639052 2548 ntBASIC12.55□□□□□ -0.4
ATRXP46100 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 INTS4P1-203ENST00000641008 3683 ntBASIC12.55□□□□□ -0.4
ATRXP46100 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.55□□□□□ -0.4
ATRXP46100 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.55□□□□□ -0.4
ATRXP46100 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.55□□□□□ -0.4
ATRXP46100 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.55□□□□□ -0.4
ATRXP46100 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.55□□□□□ -0.4
ATRXP46100 FLJ16779-201ENST00000612722 7638 ntBASIC12.55□□□□□ -0.4
ATRXP46100 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC12.54□□□□□ -0.4
ATRXP46100 FP325317.1-201ENST00000539936 1042 ntBASIC12.54□□□□□ -0.4
ATRXP46100 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC12.54□□□□□ -0.4
ATRXP46100 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.54□□□□□ -0.4
ATRXP46100 RN7SL5P-201ENST00000581458 321 ntBASIC12.54□□□□□ -0.4
ATRXP46100 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC12.54□□□□□ -0.4
ATRXP46100 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC12.54□□□□□ -0.4
ATRXP46100 BACH1-AS1-202ENST00000615718 700 ntTSL 5 BASIC12.54□□□□□ -0.4
ATRXP46100 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.54□□□□□ -0.4
ATRXP46100 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
ATRXP46100 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.54□□□□□ -0.4
ATRXP46100 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ATRXP46100 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
ATRXP46100 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ATRXP46100 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 STK16-202ENST00000409260 1493 ntTSL 5 BASIC12.54□□□□□ -0.4
ATRXP46100 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.54□□□□□ -0.4
ATRXP46100 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.54□□□□□ -0.4
ATRXP46100 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 NOS2P3-201ENST00000411468 867 ntBASIC12.54□□□□□ -0.4
ATRXP46100 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC12.54□□□□□ -0.4
ATRXP46100 AC008267.3-201ENST00000448776 712 ntBASIC12.54□□□□□ -0.4
ATRXP46100 C5orf38-203ENST00000457752 387 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.54□□□□□ -0.4
ATRXP46100 AC009238.3-201ENST00000512705 217 ntBASIC12.54□□□□□ -0.4
ATRXP46100 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC12.54□□□□□ -0.4
ATRXP46100 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC12.54□□□□□ -0.4
ATRXP46100 AC010524.1-201ENST00000596488 494 ntTSL 3 BASIC12.54□□□□□ -0.4
ATRXP46100 MEP1AP1-201ENST00000636082 1097 ntBASIC12.54□□□□□ -0.4
ATRXP46100 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ATRXP46100 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.54□□□□□ -0.4
ATRXP46100 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
ATRXP46100 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 SFPQP1-201ENST00000446621 1786 ntBASIC12.54□□□□□ -0.4
ATRXP46100 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ATRXP46100 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.54□□□□□ -0.4
ATRXP46100 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
ATRXP46100 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATRXP46100 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms