Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL15A1P39059 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL15A1P39059 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL15A1P39059 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL15A1P39059 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL15A1P39059 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL15A1P39059 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC17.3■□□□□ 0.36
COL15A1P39059 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC17.3■□□□□ 0.36
COL15A1P39059 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 RN7SL578P-201ENST00000477781 283 ntBASIC17.3■□□□□ 0.36
COL15A1P39059 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COL15A1P39059 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC17.3■□□□□ 0.36
COL15A1P39059 AP000920.1-201ENST00000531824 344 ntBASIC17.3■□□□□ 0.36
COL15A1P39059 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC17.3■□□□□ 0.36
COL15A1P39059 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC17.3■□□□□ 0.36
COL15A1P39059 AC023051.2-201ENST00000541141 460 ntBASIC17.3■□□□□ 0.36
COL15A1P39059 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC17.3■□□□□ 0.36
COL15A1P39059 CCND3P2-201ENST00000579393 537 ntBASIC17.3■□□□□ 0.36
COL15A1P39059 AC020922.4-201ENST00000621389 339 ntBASIC17.3■□□□□ 0.36
COL15A1P39059 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
COL15A1P39059 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC17.3■□□□□ 0.36
COL15A1P39059 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COL15A1P39059 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COL15A1P39059 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
COL15A1P39059 STK16-202ENST00000409260 1493 ntTSL 5 BASIC17.3■□□□□ 0.36
COL15A1P39059 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL15A1P39059 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL15A1P39059 KRT18P44-201ENST00000416086 1285 ntBASIC17.29■□□□□ 0.36
COL15A1P39059 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC17.29■□□□□ 0.36
COL15A1P39059 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC17.29■□□□□ 0.36
COL15A1P39059 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC17.29■□□□□ 0.36
COL15A1P39059 IGHVII-74-1-201ENST00000517572 241 ntBASIC17.29■□□□□ 0.36
COL15A1P39059 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC17.29■□□□□ 0.36
COL15A1P39059 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC17.29■□□□□ 0.36
COL15A1P39059 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.29■□□□□ 0.36
COL15A1P39059 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
COL15A1P39059 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COL15A1P39059 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.29■□□□□ 0.36
COL15A1P39059 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC17.29■□□□□ 0.36
COL15A1P39059 GRK6P1-201ENST00000400595 1711 ntBASIC17.29■□□□□ 0.36
COL15A1P39059 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL15A1P39059 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL15A1P39059 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC17.29■□□□□ 0.36
COL15A1P39059 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
COL15A1P39059 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
COL15A1P39059 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
COL15A1P39059 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COL15A1P39059 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC17.29■□□□□ 0.36
COL15A1P39059 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL15A1P39059 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC17.29■□□□□ 0.36
COL15A1P39059 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL15A1P39059 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC17.29■□□□□ 0.36
COL15A1P39059 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL15A1P39059 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COL15A1P39059 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.29■□□□□ 0.36
COL15A1P39059 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.29■□□□□ 0.36
COL15A1P39059 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC17.29■□□□□ 0.36
COL15A1P39059 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL15A1P39059 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COL15A1P39059 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COL15A1P39059 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
COL15A1P39059 HSD3BP1-201ENST00000286193 1111 ntBASIC17.28■□□□□ 0.36
COL15A1P39059 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COL15A1P39059 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL15A1P39059 SDCBP2P1-201ENST00000416115 614 ntBASIC17.28■□□□□ 0.36
COL15A1P39059 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC17.28■□□□□ 0.36
COL15A1P39059 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC17.28■□□□□ 0.36
COL15A1P39059 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC17.28■□□□□ 0.36
COL15A1P39059 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC17.28■□□□□ 0.36
COL15A1P39059 DPY19L2P4-201ENST00000479881 442 ntBASIC17.28■□□□□ 0.36
COL15A1P39059 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC17.28■□□□□ 0.36
COL15A1P39059 AC233724.9-201ENST00000511694 407 ntBASIC17.28■□□□□ 0.36
COL15A1P39059 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC17.28■□□□□ 0.36
COL15A1P39059 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC17.28■□□□□ 0.36
COL15A1P39059 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC17.28■□□□□ 0.36
COL15A1P39059 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC17.28■□□□□ 0.36
COL15A1P39059 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC17.28■□□□□ 0.36
COL15A1P39059 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
COL15A1P39059 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC17.28■□□□□ 0.36
COL15A1P39059 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
COL15A1P39059 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms