Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.78□□□□□ -0.2
CDH3P22223 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.78□□□□□ -0.2
CDH3P22223 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.78□□□□□ -0.2
CDH3P22223 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.78□□□□□ -0.2
CDH3P22223 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
CDH3P22223 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 KRT8P1-201ENST00000557533 1207 ntBASIC13.78□□□□□ -0.2
CDH3P22223 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.78□□□□□ -0.2
CDH3P22223 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.78□□□□□ -0.2
CDH3P22223 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 AC016629.1-201ENST00000596579 586 ntBASIC13.78□□□□□ -0.2
CDH3P22223 AC007718.1-201ENST00000621078 280 ntBASIC13.78□□□□□ -0.2
CDH3P22223 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.78□□□□□ -0.2
CDH3P22223 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.78□□□□□ -0.2
CDH3P22223 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.78□□□□□ -0.2
CDH3P22223 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CDH3P22223 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.78□□□□□ -0.2
CDH3P22223 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.78□□□□□ -0.2
CDH3P22223 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.78□□□□□ -0.2
CDH3P22223 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CDH3P22223 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
CDH3P22223 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.78□□□□□ -0.2
CDH3P22223 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.78□□□□□ -0.2
CDH3P22223 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDH3P22223 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDH3P22223 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.77□□□□□ -0.2
CDH3P22223 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
CDH3P22223 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.77□□□□□ -0.2
CDH3P22223 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CDH3P22223 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
CDH3P22223 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDH3P22223 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CDH3P22223 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CDH3P22223 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH3P22223 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CDH3P22223 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
CDH3P22223 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH3P22223 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDH3P22223 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH3P22223 AL627231.1-201ENST00000394467 1125 ntBASIC13.77□□□□□ -0.21
CDH3P22223 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDH3P22223 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.77□□□□□ -0.21
CDH3P22223 AL592076.1-201ENST00000424448 303 ntBASIC13.77□□□□□ -0.21
CDH3P22223 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH3P22223 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH3P22223 DUTP3-201ENST00000450025 415 ntBASIC13.77□□□□□ -0.21
CDH3P22223 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.77□□□□□ -0.21
CDH3P22223 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.77□□□□□ -0.21
CDH3P22223 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.77□□□□□ -0.21
CDH3P22223 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH3P22223 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH3P22223 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CDH3P22223 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDH3P22223 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH3P22223 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CDH3P22223 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CDH3P22223 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH3P22223 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.77□□□□□ -0.21
CDH3P22223 MIR3677-201ENST00000578964 60 ntBASIC13.77□□□□□ -0.21
CDH3P22223 AC007326.1-201ENST00000604539 458 ntBASIC13.77□□□□□ -0.21
CDH3P22223 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.77□□□□□ -0.21
CDH3P22223 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH3P22223 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH3P22223 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH3P22223 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.77□□□□□ -0.21
CDH3P22223 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH3P22223 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH3P22223 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.77□□□□□ -0.21
CDH3P22223 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH3P22223 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH3P22223 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.76□□□□□ -0.21
CDH3P22223 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.76□□□□□ -0.21
CDH3P22223 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CDH3P22223 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH3P22223 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.76□□□□□ -0.21
CDH3P22223 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH3P22223 AC073548.1-201ENST00000624088 1882 ntBASIC13.76□□□□□ -0.21
CDH3P22223 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH3P22223 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms