Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
APOBP04114 NRSN1-201ENST00000378475 800 ntTSL 3 BASIC8.25□□□□□ -1.09
APOBP04114 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
APOBP04114 AC074085.2-201ENST00000416734 428 ntBASIC8.25□□□□□ -1.09
APOBP04114 AL031773.1-201ENST00000453579 554 ntTSL 3 BASIC8.25□□□□□ -1.09
APOBP04114 LDHAL6CP-201ENST00000502352 1142 ntBASIC8.25□□□□□ -1.09
APOBP04114 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC8.25□□□□□ -1.09
APOBP04114 AP001120.3-201ENST00000585729 489 ntBASIC8.25□□□□□ -1.09
APOBP04114 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC8.25□□□□□ -1.09
APOBP04114 AC064862.6-203ENST00000605139 691 ntTSL 5 BASIC8.25□□□□□ -1.09
APOBP04114 AC013472.3-201ENST00000607407 659 ntBASIC8.25□□□□□ -1.09
APOBP04114 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC8.25□□□□□ -1.09
APOBP04114 AL390755.1-201ENST00000623716 2027 ntBASIC8.25□□□□□ -1.09
APOBP04114 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC8.25□□□□□ -1.09
APOBP04114 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
APOBP04114 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
APOBP04114 AL021407.3-201ENST00000407522 486 ntBASIC8.25□□□□□ -1.09
APOBP04114 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC8.25□□□□□ -1.09
APOBP04114 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 RN7SL43P-201ENST00000463926 291 ntBASIC8.25□□□□□ -1.09
APOBP04114 GOLGA2-210ENST00000490628 428 ntTSL 2 BASIC8.25□□□□□ -1.09
APOBP04114 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
APOBP04114 IGHV3-60-201ENST00000521678 354 ntBASIC8.25□□□□□ -1.09
APOBP04114 MIR6749-201ENST00000617008 69 ntBASIC8.25□□□□□ -1.09
APOBP04114 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC8.25□□□□□ -1.09
APOBP04114 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC8.25□□□□□ -1.09
APOBP04114 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC8.25□□□□□ -1.09
APOBP04114 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
APOBP04114 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC8.25□□□□□ -1.09
APOBP04114 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 SCARB2-202ENST00000452464 1495 ntTSL 2 BASIC8.25□□□□□ -1.09
APOBP04114 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC8.25□□□□□ -1.09
APOBP04114 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC8.25□□□□□ -1.09
APOBP04114 IGHV1-45-201ENST00000390621 411 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
APOBP04114 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC8.25□□□□□ -1.09
APOBP04114 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC8.25□□□□□ -1.09
APOBP04114 GINS4-203ENST00000518671 1158 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
APOBP04114 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
APOBP04114 ZDHHC8P1-202ENST00000418264 1403 ntBASIC8.25□□□□□ -1.09
APOBP04114 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC8.25□□□□□ -1.09
APOBP04114 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
APOBP04114 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
APOBP04114 POLR1C-202ENST00000372344 1119 ntTSL 5 BASIC8.25□□□□□ -1.09
APOBP04114 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC8.25□□□□□ -1.09
APOBP04114 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC8.25□□□□□ -1.09
APOBP04114 TSEN15P3-201ENST00000422363 367 ntBASIC8.25□□□□□ -1.09
APOBP04114 IGHV1OR16-3-201ENST00000568138 205 ntBASIC8.25□□□□□ -1.09
APOBP04114 AC130469.2-201ENST00000625112 1092 ntBASIC8.25□□□□□ -1.09
APOBP04114 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
APOBP04114 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC8.25□□□□□ -1.09
APOBP04114 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC8.25□□□□□ -1.09
APOBP04114 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
APOBP04114 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
APOBP04114 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC8.24□□□□□ -1.09
APOBP04114 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC8.24□□□□□ -1.09
APOBP04114 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 HTR3D-202ENST00000382489 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 FAM90A22P-201ENST00000400142 1395 ntBASIC8.24□□□□□ -1.09
APOBP04114 AC006987.4-201ENST00000430032 279 ntBASIC8.24□□□□□ -1.09
APOBP04114 LINC00271-202ENST00000436554 655 ntTSL 5 BASIC8.24□□□□□ -1.09
APOBP04114 AC046143.1-201ENST00000447139 972 ntTSL 2 BASIC8.24□□□□□ -1.09
APOBP04114 AC007690.1-201ENST00000451924 468 ntBASIC8.24□□□□□ -1.09
APOBP04114 AL109615.2-201ENST00000455005 1608 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
APOBP04114 AC017100.1-201ENST00000565978 1169 ntBASIC8.24□□□□□ -1.09
APOBP04114 AC069366.2-201ENST00000583643 430 ntBASIC8.24□□□□□ -1.09
APOBP04114 AD000091.1-201ENST00000592379 287 ntBASIC8.24□□□□□ -1.09
APOBP04114 AC015802.4-203ENST00000592622 570 ntTSL 4 BASIC8.24□□□□□ -1.09
APOBP04114 ZEB1-AS1-207ENST00000606286 476 ntTSL 4 BASIC8.24□□□□□ -1.09
APOBP04114 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC8.24□□□□□ -1.09
APOBP04114 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
APOBP04114 AC117500.5-201ENST00000623233 527 ntBASIC8.24□□□□□ -1.09
APOBP04114 AC020917.4-201ENST00000623994 1999 ntBASIC8.24□□□□□ -1.09
APOBP04114 AC016397.2-201ENST00000624848 1985 ntBASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 557.3 ms