Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AC073335.2-201ENST00000610177 3441 ntBASIC11.04□□□□□ -0.64
IFNA1P01562 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
IFNA1P01562 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
IFNA1P01562 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC11.04□□□□□ -0.64
IFNA1P01562 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC11.04□□□□□ -0.64
IFNA1P01562 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC11.04□□□□□ -0.64
IFNA1P01562 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.04□□□□□ -0.64
IFNA1P01562 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11.04□□□□□ -0.64
IFNA1P01562 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC11.04□□□□□ -0.64
IFNA1P01562 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC11.04□□□□□ -0.64
IFNA1P01562 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC11.04□□□□□ -0.64
IFNA1P01562 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC11.04□□□□□ -0.64
IFNA1P01562 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC11.04□□□□□ -0.64
IFNA1P01562 SPDYE22P-201ENST00000582158 798 ntBASIC11.04□□□□□ -0.64
IFNA1P01562 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.04□□□□□ -0.64
IFNA1P01562 AC027601.4-201ENST00000611259 610 ntBASIC11.04□□□□□ -0.64
IFNA1P01562 IRF5-214ENST00000613821 595 ntTSL 5 BASIC11.04□□□□□ -0.64
IFNA1P01562 ENOSF1-203ENST00000383578 4188 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC11.04□□□□□ -0.64
IFNA1P01562 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 SCN5A-209ENST00000451551 8343 ntTSL 5 BASIC11.04□□□□□ -0.64
IFNA1P01562 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC11.04□□□□□ -0.64
IFNA1P01562 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC11.04□□□□□ -0.64
IFNA1P01562 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 PES1-205ENST00000405677 2708 ntTSL 2 BASIC11.04□□□□□ -0.64
IFNA1P01562 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC11.04□□□□□ -0.64
IFNA1P01562 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
IFNA1P01562 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
IFNA1P01562 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.04□□□□□ -0.64
IFNA1P01562 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC11.04□□□□□ -0.64
IFNA1P01562 AL354861.3-201ENST00000600140 2412 ntBASIC11.04□□□□□ -0.64
IFNA1P01562 APC2-203ENST00000535453 11656 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IFNA1P01562 MICA-210ENST00000616296 2260 ntTSL 5 BASIC11.04□□□□□ -0.64
IFNA1P01562 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC11.03□□□□□ -0.64
IFNA1P01562 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC11.03□□□□□ -0.64
IFNA1P01562 AC106820.4-201ENST00000561847 5616 ntBASIC11.03□□□□□ -0.64
IFNA1P01562 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC11.03□□□□□ -0.64
IFNA1P01562 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 OR4D9-203ENST00000641962 6123 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
IFNA1P01562 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC11.03□□□□□ -0.64
IFNA1P01562 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 NSD3-202ENST00000317025 10776 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC11.03□□□□□ -0.64
IFNA1P01562 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC11.03□□□□□ -0.64
IFNA1P01562 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC11.03□□□□□ -0.64
IFNA1P01562 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC11.03□□□□□ -0.64
IFNA1P01562 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC11.03□□□□□ -0.64
IFNA1P01562 GPS2P2-201ENST00000430745 888 ntBASIC11.03□□□□□ -0.64
IFNA1P01562 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC11.03□□□□□ -0.64
IFNA1P01562 AL035414.1-201ENST00000451327 857 ntBASIC11.03□□□□□ -0.64
IFNA1P01562 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.03□□□□□ -0.64
IFNA1P01562 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 AC044860.1-202ENST00000559481 777 ntBASIC11.03□□□□□ -0.64
IFNA1P01562 PAM16-211ENST00000575848 518 ntTSL 3 BASIC11.03□□□□□ -0.64
IFNA1P01562 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
IFNA1P01562 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.03□□□□□ -0.64
IFNA1P01562 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC11.03□□□□□ -0.64
IFNA1P01562 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.03□□□□□ -0.64
IFNA1P01562 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
IFNA1P01562 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
IFNA1P01562 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 CEP89-201ENST00000305768 5678 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 HLA-A-201ENST00000376802 1334 ntBASIC11.03□□□□□ -0.64
IFNA1P01562 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 ZBED4-201ENST00000216268 6893 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
IFNA1P01562 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
IFNA1P01562 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms