Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
LTAP01374 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
LTAP01374 AC244394.1-201ENST00000435000 1665 ntBASIC10.51□□□□□ -0.73
LTAP01374 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 SUPT20HL1-201ENST00000436466 2618 ntBASIC10.51□□□□□ -0.73
LTAP01374 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC10.51□□□□□ -0.73
LTAP01374 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 PON3-203ENST00000427422 894 ntTSL 3 BASIC10.51□□□□□ -0.73
LTAP01374 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC10.51□□□□□ -0.73
LTAP01374 AC092580.1-201ENST00000433998 658 ntBASIC10.51□□□□□ -0.73
LTAP01374 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC10.51□□□□□ -0.73
LTAP01374 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC10.51□□□□□ -0.73
LTAP01374 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC10.51□□□□□ -0.73
LTAP01374 CHMP1AP1-201ENST00000445563 662 ntBASIC10.51□□□□□ -0.73
LTAP01374 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC10.51□□□□□ -0.73
LTAP01374 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC10.51□□□□□ -0.73
LTAP01374 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC10.51□□□□□ -0.73
LTAP01374 PGAM1P5-201ENST00000548011 764 ntBASIC10.51□□□□□ -0.73
LTAP01374 CR383656.12-201ENST00000549567 513 ntBASIC10.51□□□□□ -0.73
LTAP01374 AP001160.2-201ENST00000596071 487 ntBASIC10.51□□□□□ -0.73
LTAP01374 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC10.51□□□□□ -0.73
LTAP01374 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 AL691403.2-201ENST00000618460 490 ntBASIC10.51□□□□□ -0.73
LTAP01374 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
LTAP01374 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
LTAP01374 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 GDA-203ENST00000376986 1771 ntTSL 2 BASIC10.51□□□□□ -0.73
LTAP01374 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC10.51□□□□□ -0.73
LTAP01374 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
LTAP01374 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LTAP01374 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC10.51□□□□□ -0.73
LTAP01374 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC10.51□□□□□ -0.73
LTAP01374 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LTAP01374 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LTAP01374 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
LTAP01374 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
LTAP01374 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
LTAP01374 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC10.51□□□□□ -0.73
LTAP01374 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
LTAP01374 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LTAP01374 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC10.5□□□□□ -0.73
LTAP01374 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LTAP01374 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC10.5□□□□□ -0.73
LTAP01374 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LTAP01374 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC10.5□□□□□ -0.73
LTAP01374 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LTAP01374 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LTAP01374 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC10.5□□□□□ -0.73
LTAP01374 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LTAP01374 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC10.5□□□□□ -0.73
LTAP01374 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LTAP01374 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LTAP01374 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC10.5□□□□□ -0.73
LTAP01374 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LTAP01374 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
LTAP01374 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
LTAP01374 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LTAP01374 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LTAP01374 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LTAP01374 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LTAP01374 ZBTB12BP-201ENST00000314232 1122 ntBASIC10.5□□□□□ -0.73
LTAP01374 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC10.5□□□□□ -0.73
LTAP01374 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC10.5□□□□□ -0.73
LTAP01374 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LTAP01374 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LTAP01374 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC10.5□□□□□ -0.73
LTAP01374 METTL21AP1-201ENST00000438852 635 ntBASIC10.5□□□□□ -0.73
LTAP01374 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LTAP01374 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC10.5□□□□□ -0.73
LTAP01374 AP001889.1-201ENST00000525414 633 ntBASIC10.5□□□□□ -0.73
LTAP01374 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LTAP01374 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC10.5□□□□□ -0.73
LTAP01374 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC10.5□□□□□ -0.73
LTAP01374 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC10.5□□□□□ -0.73
LTAP01374 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LTAP01374 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC10.5□□□□□ -0.73
LTAP01374 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC10.5□□□□□ -0.73
LTAP01374 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC10.5□□□□□ -0.73
LTAP01374 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC10.5□□□□□ -0.73
LTAP01374 AP001462.1-201ENST00000594089 452 ntBASIC10.5□□□□□ -0.73
LTAP01374 AL358472.5-202ENST00000641448 1267 ntBASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms