Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.75□□□□□ -0.21
PDGFBP01127 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PDGFBP01127 NRADDP-202ENST00000641269 1585 ntBASIC13.75□□□□□ -0.21
PDGFBP01127 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.74□□□□□ -0.21
PDGFBP01127 MTHFR-210ENST00000641407 2387 ntBASIC13.74□□□□□ -0.21
PDGFBP01127 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.74□□□□□ -0.21
PDGFBP01127 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
PDGFBP01127 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
PDGFBP01127 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
PDGFBP01127 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
PDGFBP01127 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PDGFBP01127 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
PDGFBP01127 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC13.74□□□□□ -0.21
PDGFBP01127 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 AL391903.1-201ENST00000407513 365 ntBASIC13.74□□□□□ -0.21
PDGFBP01127 TUBB8P9-201ENST00000422534 1276 ntBASIC13.74□□□□□ -0.21
PDGFBP01127 TUBB8P10-201ENST00000430210 1279 ntBASIC13.74□□□□□ -0.21
PDGFBP01127 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PDGFBP01127 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC13.74□□□□□ -0.21
PDGFBP01127 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC13.74□□□□□ -0.21
PDGFBP01127 NEMF-210ENST00000556672 590 ntTSL 2 BASIC13.74□□□□□ -0.21
PDGFBP01127 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC13.74□□□□□ -0.21
PDGFBP01127 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC13.74□□□□□ -0.21
PDGFBP01127 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 MIR4309-201ENST00000582498 83 ntBASIC13.74□□□□□ -0.21
PDGFBP01127 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC13.74□□□□□ -0.21
PDGFBP01127 AC022382.1-201ENST00000602768 336 ntBASIC13.74□□□□□ -0.21
PDGFBP01127 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC13.74□□□□□ -0.21
PDGFBP01127 AC099552.4-201ENST00000624248 949 ntBASIC13.74□□□□□ -0.21
PDGFBP01127 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC13.74□□□□□ -0.21
PDGFBP01127 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
PDGFBP01127 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDGFBP01127 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.73□□□□□ -0.21
PDGFBP01127 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PDGFBP01127 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDGFBP01127 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC13.73□□□□□ -0.21
PDGFBP01127 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDGFBP01127 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDGFBP01127 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDGFBP01127 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
PDGFBP01127 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDGFBP01127 TUBA3GP-201ENST00000410028 1325 ntBASIC13.73□□□□□ -0.21
PDGFBP01127 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC13.73□□□□□ -0.21
PDGFBP01127 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC13.73□□□□□ -0.21
PDGFBP01127 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDGFBP01127 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PDGFBP01127 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.73□□□□□ -0.21
PDGFBP01127 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
PDGFBP01127 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PDGFBP01127 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDGFBP01127 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PDGFBP01127 HLA-DQB3-203ENST00000425319 356 ntBASIC13.73□□□□□ -0.21
PDGFBP01127 AC012513.2-201ENST00000441511 1137 ntBASIC13.73□□□□□ -0.21
PDGFBP01127 AC008267.3-201ENST00000448776 712 ntBASIC13.73□□□□□ -0.21
PDGFBP01127 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC13.73□□□□□ -0.21
PDGFBP01127 RN7SL477P-201ENST00000488440 286 ntBASIC13.73□□□□□ -0.21
PDGFBP01127 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.73□□□□□ -0.21
PDGFBP01127 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC13.73□□□□□ -0.21
PDGFBP01127 FAM213AP2-201ENST00000521579 683 ntBASIC13.73□□□□□ -0.21
PDGFBP01127 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PDGFBP01127 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC13.73□□□□□ -0.21
PDGFBP01127 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC13.73□□□□□ -0.21
PDGFBP01127 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PDGFBP01127 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC13.73□□□□□ -0.21
PDGFBP01127 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PDGFBP01127 AC089987.1-201ENST00000551654 2209 ntBASIC13.73□□□□□ -0.21
PDGFBP01127 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDGFBP01127 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
PDGFBP01127 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDGFBP01127 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
PDGFBP01127 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms