Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 AC093462.1-201ENST00000621167 1683 ntBASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.42□□□□□ -0.1
DNMT3BQ9UBC3 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 AF274858.1-201ENST00000406288 372 ntBASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 PGAM1P11-201ENST00000416729 680 ntBASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 AC041040.1-201ENST00000425197 460 ntBASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 AC079250.1-201ENST00000456046 531 ntBASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 AC061965.1-201ENST00000560524 1465 ntBASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DNMT3BQ9UBC3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 AC092896.1-201ENST00000465850 380 ntBASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 AC025594.1-201ENST00000469533 543 ntBASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 IGHEP2-201ENST00000519308 1256 ntBASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 AC027139.1-201ENST00000565286 951 ntBASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 BEND3P1-201ENST00000421591 1944 ntBASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 MST1P2-201ENST00000457982 2291 ntBASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 MYO15B-237ENST00000642007 4893 ntBASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
DNMT3BQ9UBC3 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms