Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 AC120498.5-201ENST00000561757 299 ntBASIC13.8□□□□□ -0.2
NCDNQ9UBB6 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 AC148476.1-201ENST00000622182 705 ntBASIC13.8□□□□□ -0.2
NCDNQ9UBB6 AC026336.4-201ENST00000624565 1050 ntBASIC13.8□□□□□ -0.2
NCDNQ9UBB6 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 AC005865.2-202ENST00000635814 725 ntBASIC13.8□□□□□ -0.2
NCDNQ9UBB6 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.8□□□□□ -0.2
NCDNQ9UBB6 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 TBC1D27-202ENST00000424239 1573 ntBASIC13.79□□□□□ -0.2
NCDNQ9UBB6 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 CCT8L1P-201ENST00000465400 1674 ntBASIC13.79□□□□□ -0.2
NCDNQ9UBB6 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 CFL1P6-201ENST00000400899 494 ntBASIC13.79□□□□□ -0.2
NCDNQ9UBB6 TUBB2BP1-201ENST00000404155 871 ntBASIC13.79□□□□□ -0.2
NCDNQ9UBB6 SNORD88B-201ENST00000408454 91 ntBASIC13.79□□□□□ -0.2
NCDNQ9UBB6 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 RPSAP12-201ENST00000435879 888 ntBASIC13.79□□□□□ -0.2
NCDNQ9UBB6 HNRNPA1P10-201ENST00000444945 962 ntBASIC13.79□□□□□ -0.2
NCDNQ9UBB6 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 TMA16-204ENST00000508268 608 ntTSL 2 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 CCNL2P1-201ENST00000512846 969 ntBASIC13.79□□□□□ -0.2
NCDNQ9UBB6 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 AL359219.1-201ENST00000556311 934 ntBASIC13.79□□□□□ -0.2
NCDNQ9UBB6 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 BX322562.1-201ENST00000617004 561 ntBASIC13.79□□□□□ -0.2
NCDNQ9UBB6 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 BX322534.1-201ENST00000635574 241 ntBASIC13.79□□□□□ -0.2
NCDNQ9UBB6 AC215524.1-201ENST00000635696 241 ntBASIC13.79□□□□□ -0.2
NCDNQ9UBB6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NCDNQ9UBB6 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms