Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 GOLGA2P8-201ENST00000505201 779 ntBASIC17.19■□□□□ 0.34
UPF2Q9HAU5 RFPL4AP1-201ENST00000530883 850 ntBASIC17.19■□□□□ 0.34
UPF2Q9HAU5 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 PPY2P-201ENST00000582808 702 ntBASIC17.19■□□□□ 0.34
UPF2Q9HAU5 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 E2F3P2-201ENST00000447755 1422 ntBASIC17.19■□□□□ 0.34
UPF2Q9HAU5 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
UPF2Q9HAU5 AC090114.2-201ENST00000608477 7054 ntBASIC17.19■□□□□ 0.34
UPF2Q9HAU5 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 FAM95B1-212ENST00000592873 4692 ntBASIC17.18■□□□□ 0.34
UPF2Q9HAU5 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 AL022323.5-201ENST00000624101 2059 ntBASIC17.18■□□□□ 0.34
UPF2Q9HAU5 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 PIN1P1-201ENST00000412108 996 ntBASIC17.18■□□□□ 0.34
UPF2Q9HAU5 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 AC009884.2-201ENST00000603110 324 ntBASIC17.18■□□□□ 0.34
UPF2Q9HAU5 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 AL591163.1-201ENST00000641757 987 ntBASIC17.18■□□□□ 0.34
UPF2Q9HAU5 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPF2Q9HAU5 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 CHMP1AP1-201ENST00000445563 662 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms