Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 CSNK1G2P1-201ENST00000442675 955 ntBASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 AC008267.1-201ENST00000474858 1069 ntBASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 RPL17P45-201ENST00000586289 509 ntBASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 SPCS2P2-201ENST00000603270 608 ntBASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 AC011491.1-203ENST00000637688 543 ntBASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 SNX18-202ENST00000343017 3140 ntBASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2E2Q96LR5 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 RPSAP31-201ENST00000416648 895 ntBASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 RGS5-216ENST00000449680 788 ntTSL 3 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 DPY19L2P5-201ENST00000456300 331 ntBASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 AP003398.1-201ENST00000531124 318 ntBASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 NPM1P43-201ENST00000558669 786 ntBASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 MIR3180-2-201ENST00000581748 88 ntBASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 AC012073.1-201ENST00000606114 1108 ntBASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 AC018635.2-201ENST00000608625 364 ntBASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 AC005618.3-201ENST00000624928 458 ntBASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 LINC00244-201ENST00000625073 613 ntBASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
UBE2E2Q96LR5 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2E2Q96LR5 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC10.8□□□□□ -0.68
UBE2E2Q96LR5 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms