Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-CQ95604 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-CQ95604 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-CQ95604 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-CQ95604 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-CQ95604 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-CQ95604 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.18□□□□□ -0.14
HLA-CQ95604 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-CQ95604 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-CQ95604 AC008741.2-201ENST00000612792 3115 ntBASIC14.18□□□□□ -0.14
HLA-CQ95604 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
HLA-CQ95604 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HLA-CQ95604 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-CQ95604 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HLA-CQ95604 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-CQ95604 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-CQ95604 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-CQ95604 AL118508.1-201ENST00000613502 2345 ntBASIC14.18□□□□□ -0.14
HLA-CQ95604 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HLA-CQ95604 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-CQ95604 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HLA-CQ95604 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HLA-CQ95604 USP17L6P-201ENST00000382470 1197 ntBASIC14.18□□□□□ -0.14
HLA-CQ95604 AL356653.1-201ENST00000402743 360 ntBASIC14.18□□□□□ -0.14
HLA-CQ95604 SPTLC1P3-201ENST00000403408 259 ntBASIC14.18□□□□□ -0.14
HLA-CQ95604 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC14.18□□□□□ -0.14
HLA-CQ95604 AC007279.1-201ENST00000448547 837 ntBASIC14.18□□□□□ -0.14
HLA-CQ95604 AC009517.1-201ENST00000454750 570 ntBASIC14.18□□□□□ -0.14
HLA-CQ95604 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC14.18□□□□□ -0.14
HLA-CQ95604 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-CQ95604 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-CQ95604 AC010395.2-201ENST00000509899 904 ntBASIC14.18□□□□□ -0.14
HLA-CQ95604 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-CQ95604 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-CQ95604 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-CQ95604 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC14.18□□□□□ -0.14
HLA-CQ95604 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC14.18□□□□□ -0.14
HLA-CQ95604 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-CQ95604 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC14.18□□□□□ -0.14
HLA-CQ95604 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HLA-CQ95604 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-CQ95604 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-CQ95604 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-CQ95604 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HLA-CQ95604 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-CQ95604 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.18□□□□□ -0.14
HLA-CQ95604 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.18□□□□□ -0.14
HLA-CQ95604 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HLA-CQ95604 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-CQ95604 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-CQ95604 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HLA-CQ95604 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-CQ95604 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC14.17□□□□□ -0.14
HLA-CQ95604 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC14.17□□□□□ -0.14
HLA-CQ95604 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 MTND2P9-201ENST00000422293 931 ntBASIC14.17□□□□□ -0.14
HLA-CQ95604 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC14.17□□□□□ -0.14
HLA-CQ95604 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-CQ95604 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 AC253536.5-201ENST00000506097 347 ntBASIC14.17□□□□□ -0.14
HLA-CQ95604 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC14.17□□□□□ -0.14
HLA-CQ95604 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HLA-CQ95604 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 PMM2-216ENST00000569958 698 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-CQ95604 AC131274.3-201ENST00000578745 1271 ntBASIC14.17□□□□□ -0.14
HLA-CQ95604 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC14.17□□□□□ -0.14
HLA-CQ95604 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-CQ95604 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HLA-CQ95604 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-CQ95604 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 NRADDP-202ENST00000641269 1585 ntBASIC14.17□□□□□ -0.14
HLA-CQ95604 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-CQ95604 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms