Protein–RNA interactions for Protein: Q8TCU5

GRIN3A, Glutamate receptor ionotropic, NMDA 3A, humanhuman

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3AQ8TCU5 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GRIN3AQ8TCU5 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GRIN3AQ8TCU5 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
GRIN3AQ8TCU5 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
GRIN3AQ8TCU5 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
GRIN3AQ8TCU5 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 AL512306.1-201ENST00000432698 848 ntBASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 ERP29P1-201ENST00000442902 706 ntBASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 AC098935.1-201ENST00000446057 611 ntBASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 AC095040.1-201ENST00000513286 675 ntBASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 AP002803.1-201ENST00000528836 498 ntBASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 AC135983.4-201ENST00000564116 1262 ntBASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 RN7SL665P-201ENST00000578793 300 ntBASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 SPCS2P2-201ENST00000603270 608 ntBASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 AC084781.1-201ENST00000613737 656 ntBASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.27□□□□□ -0.13
GRIN3AQ8TCU5 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 RPL13AP3-202ENST00000494676 1473 ntBASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 SHMT1P1-201ENST00000419974 1312 ntBASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 Z69890.1-201ENST00000382990 339 ntBASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 MPRIPP1-201ENST00000452433 1089 ntBASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 GOLGA2P8-201ENST00000505201 779 ntBASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 SLC25A15P3-201ENST00000505530 290 ntBASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 KLF17P1-201ENST00000547105 1126 ntBASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 MIR4722-201ENST00000578292 60 ntBASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 MIR3180-2-201ENST00000581748 88 ntBASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 AC087045.2-201ENST00000606279 1003 ntBASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GRIN3AQ8TCU5 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms