Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.83
CDC42BPAQ5VT25 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
CDC42BPAQ5VT25 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
CDC42BPAQ5VT25 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 AC011474.4-201ENST00000623523 2076 ntBASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 SLC25A15P1-201ENST00000456738 342 ntBASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 AC010395.2-201ENST00000509899 904 ntBASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDC42BPAQ5VT25 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 AC009093.9-201ENST00000566038 1611 ntBASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 CLK2P1-201ENST00000416636 1294 ntBASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 PTPA-219ENST00000435305 530 ntTSL 2 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 AC063924.1-201ENST00000546680 673 ntBASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 AC072061.1-201ENST00000569710 2234 ntBASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 SAP18P2-201ENST00000434334 459 ntBASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 RNASEH2CP1-201ENST00000454281 502 ntBASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC20.19■□□□□ 0.82
CDC42BPAQ5VT25 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 ZDHHC8P1-202ENST00000418264 1403 ntBASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms