Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.62□□□□□ -0.39
APOBEC1P41238 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
APOBEC1P41238 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
APOBEC1P41238 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOBEC1P41238 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 CICP8-201ENST00000455800 2813 ntBASIC12.61□□□□□ -0.39
APOBEC1P41238 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
APOBEC1P41238 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.61□□□□□ -0.39
APOBEC1P41238 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.61□□□□□ -0.39
APOBEC1P41238 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
APOBEC1P41238 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
APOBEC1P41238 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
APOBEC1P41238 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
APOBEC1P41238 CAP2P1-201ENST00000557743 1390 ntBASIC12.61□□□□□ -0.39
APOBEC1P41238 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.61□□□□□ -0.39
APOBEC1P41238 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.61□□□□□ -0.39
APOBEC1P41238 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.61□□□□□ -0.39
APOBEC1P41238 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
APOBEC1P41238 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.61□□□□□ -0.39
APOBEC1P41238 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.61□□□□□ -0.39
APOBEC1P41238 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.61□□□□□ -0.39
APOBEC1P41238 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
APOBEC1P41238 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
APOBEC1P41238 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.61□□□□□ -0.39
APOBEC1P41238 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.61□□□□□ -0.39
APOBEC1P41238 AC005722.1-201ENST00000431878 964 ntBASIC12.61□□□□□ -0.39
APOBEC1P41238 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.61□□□□□ -0.39
APOBEC1P41238 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.61□□□□□ -0.39
APOBEC1P41238 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.61□□□□□ -0.39
APOBEC1P41238 RN7SL720P-201ENST00000488178 304 ntBASIC12.61□□□□□ -0.39
APOBEC1P41238 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.61□□□□□ -0.39
APOBEC1P41238 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
APOBEC1P41238 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.61□□□□□ -0.39
APOBEC1P41238 MIR3940-201ENST00000579148 102 ntBASIC12.61□□□□□ -0.39
APOBEC1P41238 MIR4265-201ENST00000582152 99 ntBASIC12.61□□□□□ -0.39
APOBEC1P41238 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.61□□□□□ -0.39
APOBEC1P41238 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.61□□□□□ -0.39
APOBEC1P41238 AC006372.4-201ENST00000624122 1543 ntBASIC12.61□□□□□ -0.39
APOBEC1P41238 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.61□□□□□ -0.39
APOBEC1P41238 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
APOBEC1P41238 Z98885.3-201ENST00000624882 1757 ntBASIC12.61□□□□□ -0.39
APOBEC1P41238 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.61□□□□□ -0.39
APOBEC1P41238 AC020763.3-201ENST00000625095 2904 ntBASIC12.61□□□□□ -0.39
APOBEC1P41238 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.61□□□□□ -0.39
APOBEC1P41238 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOBEC1P41238 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.6□□□□□ -0.39
APOBEC1P41238 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
APOBEC1P41238 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.6□□□□□ -0.39
APOBEC1P41238 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.6□□□□□ -0.39
APOBEC1P41238 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
APOBEC1P41238 PTENP1-202ENST00000532280 3996 ntBASIC12.6□□□□□ -0.39
APOBEC1P41238 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
APOBEC1P41238 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APOBEC1P41238 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.6□□□□□ -0.39
APOBEC1P41238 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.6□□□□□ -0.39
APOBEC1P41238 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
APOBEC1P41238 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
APOBEC1P41238 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms