Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.82□□□□□ -0.2
COL6A2P12110 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL6A2P12110 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL6A2P12110 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC13.82□□□□□ -0.2
COL6A2P12110 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL6A2P12110 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL6A2P12110 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL6A2P12110 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL6A2P12110 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.82□□□□□ -0.2
COL6A2P12110 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC13.82□□□□□ -0.2
COL6A2P12110 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL6A2P12110 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.82□□□□□ -0.2
COL6A2P12110 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.82□□□□□ -0.2
COL6A2P12110 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.82□□□□□ -0.2
COL6A2P12110 MIR663B-201ENST00000408361 115 ntBASIC13.82□□□□□ -0.2
COL6A2P12110 AC006987.1-201ENST00000413610 527 ntBASIC13.82□□□□□ -0.2
COL6A2P12110 BX679664.3-201ENST00000414070 555 ntBASIC13.82□□□□□ -0.2
COL6A2P12110 AC099336.1-201ENST00000417053 1171 ntBASIC13.82□□□□□ -0.2
COL6A2P12110 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.82□□□□□ -0.2
COL6A2P12110 AC113935.1-201ENST00000471722 555 ntBASIC13.82□□□□□ -0.2
COL6A2P12110 RN7SL277P-201ENST00000481521 288 ntBASIC13.82□□□□□ -0.2
COL6A2P12110 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.82□□□□□ -0.2
COL6A2P12110 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.82□□□□□ -0.2
COL6A2P12110 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
COL6A2P12110 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.82□□□□□ -0.2
COL6A2P12110 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.82□□□□□ -0.2
COL6A2P12110 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.82□□□□□ -0.2
COL6A2P12110 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.82□□□□□ -0.2
COL6A2P12110 SNORD3B-2-202ENST00000571722 791 ntBASIC13.82□□□□□ -0.2
COL6A2P12110 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.82□□□□□ -0.2
COL6A2P12110 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.82□□□□□ -0.2
COL6A2P12110 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.82□□□□□ -0.2
COL6A2P12110 AC004923.1-202ENST00000642106 209 ntBASIC13.82□□□□□ -0.2
COL6A2P12110 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL6A2P12110 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL6A2P12110 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.82□□□□□ -0.2
COL6A2P12110 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
COL6A2P12110 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL6A2P12110 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
COL6A2P12110 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL6A2P12110 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
COL6A2P12110 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL6A2P12110 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.82□□□□□ -0.2
COL6A2P12110 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL6A2P12110 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL6A2P12110 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC13.82□□□□□ -0.2
COL6A2P12110 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL6A2P12110 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COL6A2P12110 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COL6A2P12110 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.82□□□□□ -0.2
COL6A2P12110 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.81□□□□□ -0.2
COL6A2P12110 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL6A2P12110 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.81□□□□□ -0.2
COL6A2P12110 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL6A2P12110 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL6A2P12110 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL6A2P12110 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL6A2P12110 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL6A2P12110 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL6A2P12110 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC13.81□□□□□ -0.2
COL6A2P12110 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC13.81□□□□□ -0.2
COL6A2P12110 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.81□□□□□ -0.2
COL6A2P12110 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL6A2P12110 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.81□□□□□ -0.2
COL6A2P12110 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.81□□□□□ -0.2
COL6A2P12110 MIR1909-201ENST00000411312 80 ntBASIC13.81□□□□□ -0.2
COL6A2P12110 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.81□□□□□ -0.2
COL6A2P12110 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.81□□□□□ -0.2
COL6A2P12110 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
COL6A2P12110 Z93015.1-201ENST00000451718 390 ntBASIC13.81□□□□□ -0.2
COL6A2P12110 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.81□□□□□ -0.2
COL6A2P12110 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC13.81□□□□□ -0.2
COL6A2P12110 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL6A2P12110 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
COL6A2P12110 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.81□□□□□ -0.2
COL6A2P12110 AC009779.1-201ENST00000551138 283 ntBASIC13.81□□□□□ -0.2
COL6A2P12110 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
COL6A2P12110 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.81□□□□□ -0.2
COL6A2P12110 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.81□□□□□ -0.2
COL6A2P12110 AL132994.2-201ENST00000603120 687 ntBASIC13.81□□□□□ -0.2
COL6A2P12110 AC090164.2-201ENST00000611487 516 ntBASIC13.81□□□□□ -0.2
COL6A2P12110 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.81□□□□□ -0.2
COL6A2P12110 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL6A2P12110 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.81□□□□□ -0.2
COL6A2P12110 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.81□□□□□ -0.2
COL6A2P12110 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
COL6A2P12110 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL6A2P12110 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.81□□□□□ -0.2
COL6A2P12110 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL6A2P12110 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL6A2P12110 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL6A2P12110 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.81□□□□□ -0.2
COL6A2P12110 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL6A2P12110 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL6A2P12110 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.81□□□□□ -0.2
COL6A2P12110 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
COL6A2P12110 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COL6A2P12110 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COL6A2P12110 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
COL6A2P12110 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms