Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.74□□□□□ -0.37
P04436 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
P04436 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 RNVU1-8-201ENST00000364272 125 ntBASIC12.74□□□□□ -0.37
P04436 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC12.74□□□□□ -0.37
P04436 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
P04436 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
P04436 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.74□□□□□ -0.37
P04436 RPL3P2-204ENST00000413027 1203 ntBASIC12.74□□□□□ -0.37
P04436 OR52M2P-201ENST00000414298 959 ntBASIC12.74□□□□□ -0.37
P04436 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC12.74□□□□□ -0.37
P04436 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.74□□□□□ -0.37
P04436 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.74□□□□□ -0.37
P04436 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC12.74□□□□□ -0.37
P04436 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC12.74□□□□□ -0.37
P04436 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC12.74□□□□□ -0.37
P04436 VENTXP3-201ENST00000546480 773 ntBASIC12.74□□□□□ -0.37
P04436 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.74□□□□□ -0.37
P04436 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 KRT18P8-201ENST00000581937 1246 ntBASIC12.74□□□□□ -0.37
P04436 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.74□□□□□ -0.37
P04436 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
P04436 AL049840.2-201ENST00000602722 535 ntBASIC12.74□□□□□ -0.37
P04436 WT1-AS_6.1-201ENST00000614919 121 ntBASIC12.74□□□□□ -0.37
P04436 AP003419.4-201ENST00000616071 517 ntBASIC12.74□□□□□ -0.37
P04436 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
P04436 AL928654.5-201ENST00000624831 2501 ntBASIC12.74□□□□□ -0.37
P04436 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
P04436 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
P04436 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 MST1P2-201ENST00000457982 2291 ntBASIC12.74□□□□□ -0.37
P04436 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.74□□□□□ -0.37
P04436 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.74□□□□□ -0.37
P04436 AC026748.1-201ENST00000624349 3251 ntBASIC12.74□□□□□ -0.37
P04436 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
P04436 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
P04436 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
P04436 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.74□□□□□ -0.37
P04436 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
P04436 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
P04436 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
P04436 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.73□□□□□ -0.37
P04436 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
P04436 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.73□□□□□ -0.37
P04436 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
P04436 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12.73□□□□□ -0.37
P04436 AC005722.1-201ENST00000431878 964 ntBASIC12.73□□□□□ -0.37
P04436 AC253536.4-201ENST00000440539 267 ntBASIC12.73□□□□□ -0.37
P04436 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.73□□□□□ -0.37
P04436 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.73□□□□□ -0.37
P04436 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC12.73□□□□□ -0.37
P04436 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.73□□□□□ -0.37
P04436 AC093300.1-201ENST00000510368 1201 ntBASIC12.73□□□□□ -0.37
P04436 AC100858.1-201ENST00000514059 1228 ntBASIC12.73□□□□□ -0.37
P04436 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC12.73□□□□□ -0.37
P04436 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.73□□□□□ -0.37
P04436 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms