Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC11.86□□□□□ -0.51
CD3DP04234 AC018445.4-201ENST00000624066 2291 ntBASIC11.86□□□□□ -0.51
CD3DP04234 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.86□□□□□ -0.51
CD3DP04234 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC11.86□□□□□ -0.51
CD3DP04234 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CD3DP04234 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC11.86□□□□□ -0.51
CD3DP04234 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC11.86□□□□□ -0.51
CD3DP04234 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CD3DP04234 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CD3DP04234 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC11.86□□□□□ -0.51
CD3DP04234 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CD3DP04234 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC11.86□□□□□ -0.51
CD3DP04234 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC11.86□□□□□ -0.51
CD3DP04234 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CD3DP04234 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
CD3DP04234 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC11.86□□□□□ -0.51
CD3DP04234 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC11.86□□□□□ -0.51
CD3DP04234 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CD3DP04234 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 DFFBP1-201ENST00000433250 979 ntBASIC11.86□□□□□ -0.51
CD3DP04234 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC11.86□□□□□ -0.51
CD3DP04234 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC11.86□□□□□ -0.51
CD3DP04234 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC11.86□□□□□ -0.51
CD3DP04234 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC11.86□□□□□ -0.51
CD3DP04234 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.86□□□□□ -0.51
CD3DP04234 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CD3DP04234 PAM16-204ENST00000571941 674 ntTSL 3 BASIC11.86□□□□□ -0.51
CD3DP04234 CTBP2P3-201ENST00000585629 1255 ntBASIC11.86□□□□□ -0.51
CD3DP04234 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC11.86□□□□□ -0.51
CD3DP04234 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC11.86□□□□□ -0.51
CD3DP04234 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CD3DP04234 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC11.86□□□□□ -0.51
CD3DP04234 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC11.86□□□□□ -0.51
CD3DP04234 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CD3DP04234 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC11.86□□□□□ -0.51
CD3DP04234 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC11.86□□□□□ -0.51
CD3DP04234 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CD3DP04234 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CD3DP04234 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC11.86□□□□□ -0.51
CD3DP04234 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CD3DP04234 LINC00115-201ENST00000473798 1317 ntBASIC11.86□□□□□ -0.51
CD3DP04234 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC11.85□□□□□ -0.51
CD3DP04234 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC11.85□□□□□ -0.51
CD3DP04234 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC11.85□□□□□ -0.51
CD3DP04234 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CD3DP04234 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC11.85□□□□□ -0.51
CD3DP04234 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 TRIM80P-201ENST00000455685 2848 ntBASIC11.85□□□□□ -0.51
CD3DP04234 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
CD3DP04234 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 BAATP1-201ENST00000412284 1225 ntBASIC11.85□□□□□ -0.51
CD3DP04234 SSR4P1-201ENST00000415143 412 ntBASIC11.85□□□□□ -0.51
CD3DP04234 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CD3DP04234 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC11.85□□□□□ -0.51
CD3DP04234 AGER-214ENST00000538695 487 ntTSL 2 BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms