Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
HMGB1P1B2RPK0 LINC00538-201ENST00000626109 1906 ntBASIC14.19□□□□□ -0.14
HMGB1P1B2RPK0 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC14.19□□□□□ -0.14
HMGB1P1B2RPK0 GDA-203ENST00000376986 1771 ntTSL 2 BASIC14.19□□□□□ -0.14
HMGB1P1B2RPK0 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.19□□□□□ -0.14
HMGB1P1B2RPK0 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC14.19□□□□□ -0.14
HMGB1P1B2RPK0 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGB1P1B2RPK0 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGB1P1B2RPK0 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGB1P1B2RPK0 DNM1P41-201ENST00000623634 3350 ntBASIC14.19□□□□□ -0.14
HMGB1P1B2RPK0 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 AC093462.1-201ENST00000621167 1683 ntBASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 AC092552.1-201ENST00000547243 906 ntBASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 CLUHP6-201ENST00000580789 941 ntBASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 CTBP2P3-201ENST00000585629 1255 ntBASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 AC015911.4-201ENST00000588022 1070 ntBASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 AL356740.1-201ENST00000602192 1297 ntBASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 AC133539.2-201ENST00000604757 467 ntBASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGB1P1B2RPK0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGB1P1B2RPK0 AL139158.3-201ENST00000641212 1562 ntBASIC14.17□□□□□ -0.14
HMGB1P1B2RPK0 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HMGB1P1B2RPK0 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC14.17□□□□□ -0.14
HMGB1P1B2RPK0 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
HMGB1P1B2RPK0 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HMGB1P1B2RPK0 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGB1P1B2RPK0 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGB1P1B2RPK0 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGB1P1B2RPK0 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGB1P1B2RPK0 AC009549.1-201ENST00000603468 1686 ntBASIC14.17□□□□□ -0.14
HMGB1P1B2RPK0 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGB1P1B2RPK0 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGB1P1B2RPK0 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGB1P1B2RPK0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.17□□□□□ -0.14
HMGB1P1B2RPK0 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms