Protein–RNA interactions for Protein: Q9Y6N1

COX11, Cytochrome c oxidase assembly protein COX11, mitochondrial, humanhuman

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX11Q9Y6N1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.26■□□□□ 0.19
COX11Q9Y6N1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COX11Q9Y6N1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
COX11Q9Y6N1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.26■□□□□ 0.19
COX11Q9Y6N1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COX11Q9Y6N1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.26■□□□□ 0.19
COX11Q9Y6N1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.26■□□□□ 0.19
COX11Q9Y6N1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
COX11Q9Y6N1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COX11Q9Y6N1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.26■□□□□ 0.19
COX11Q9Y6N1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.25■□□□□ 0.19
COX11Q9Y6N1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
COX11Q9Y6N1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.25■□□□□ 0.19
COX11Q9Y6N1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COX11Q9Y6N1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COX11Q9Y6N1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COX11Q9Y6N1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
COX11Q9Y6N1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COX11Q9Y6N1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COX11Q9Y6N1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COX11Q9Y6N1 AC093536.1-201ENST00000569153 554 ntBASIC16.25■□□□□ 0.19
COX11Q9Y6N1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.25■□□□□ 0.19
COX11Q9Y6N1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.25■□□□□ 0.19
COX11Q9Y6N1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COX11Q9Y6N1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COX11Q9Y6N1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.25■□□□□ 0.19
COX11Q9Y6N1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COX11Q9Y6N1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.25■□□□□ 0.19
COX11Q9Y6N1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COX11Q9Y6N1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COX11Q9Y6N1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COX11Q9Y6N1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COX11Q9Y6N1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COX11Q9Y6N1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.24■□□□□ 0.19
COX11Q9Y6N1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
COX11Q9Y6N1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC16.24■□□□□ 0.19
COX11Q9Y6N1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
COX11Q9Y6N1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
COX11Q9Y6N1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.24■□□□□ 0.19
COX11Q9Y6N1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
COX11Q9Y6N1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
COX11Q9Y6N1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
COX11Q9Y6N1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.23■□□□□ 0.19
COX11Q9Y6N1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.23■□□□□ 0.19
COX11Q9Y6N1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COX11Q9Y6N1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.23■□□□□ 0.19
COX11Q9Y6N1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.23■□□□□ 0.19
COX11Q9Y6N1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COX11Q9Y6N1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COX11Q9Y6N1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COX11Q9Y6N1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.23■□□□□ 0.19
COX11Q9Y6N1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.23■□□□□ 0.19
COX11Q9Y6N1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COX11Q9Y6N1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COX11Q9Y6N1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COX11Q9Y6N1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COX11Q9Y6N1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COX11Q9Y6N1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
COX11Q9Y6N1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COX11Q9Y6N1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COX11Q9Y6N1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
COX11Q9Y6N1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COX11Q9Y6N1 AC004812.2-201ENST00000611079 2094 ntBASIC16.22■□□□□ 0.19
COX11Q9Y6N1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COX11Q9Y6N1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
COX11Q9Y6N1 AC133552.2-201ENST00000619106 1032 ntBASIC16.22■□□□□ 0.19
COX11Q9Y6N1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
COX11Q9Y6N1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COX11Q9Y6N1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COX11Q9Y6N1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COX11Q9Y6N1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COX11Q9Y6N1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.22■□□□□ 0.19
COX11Q9Y6N1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COX11Q9Y6N1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.21■□□□□ 0.19
COX11Q9Y6N1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
COX11Q9Y6N1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.21■□□□□ 0.19
COX11Q9Y6N1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.21■□□□□ 0.19
COX11Q9Y6N1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COX11Q9Y6N1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COX11Q9Y6N1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COX11Q9Y6N1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
COX11Q9Y6N1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
COX11Q9Y6N1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COX11Q9Y6N1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COX11Q9Y6N1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COX11Q9Y6N1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COX11Q9Y6N1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
COX11Q9Y6N1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.21■□□□□ 0.19
COX11Q9Y6N1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
COX11Q9Y6N1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
COX11Q9Y6N1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
COX11Q9Y6N1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COX11Q9Y6N1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
COX11Q9Y6N1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.2■□□□□ 0.18
COX11Q9Y6N1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
COX11Q9Y6N1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COX11Q9Y6N1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.2■□□□□ 0.18
COX11Q9Y6N1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.2■□□□□ 0.18
COX11Q9Y6N1 NTF6A-201ENST00000591175 560 ntBASIC16.2■□□□□ 0.18
COX11Q9Y6N1 AC026202.3-201ENST00000600805 1127 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms