Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DNMT3AQ9Y6K1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DNMT3AQ9Y6K1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
DNMT3AQ9Y6K1 AC133561.4-201ENST00000566112 224 ntBASIC21.96■■□□□ 1.11
DNMT3AQ9Y6K1 AC110285.6-201ENST00000617652 491 ntBASIC21.96■■□□□ 1.11
DNMT3AQ9Y6K1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.96■■□□□ 1.11
DNMT3AQ9Y6K1 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.96■■□□□ 1.11
DNMT3AQ9Y6K1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.96■■□□□ 1.11
DNMT3AQ9Y6K1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
DNMT3AQ9Y6K1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
DNMT3AQ9Y6K1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.96■■□□□ 1.11
DNMT3AQ9Y6K1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
DNMT3AQ9Y6K1 SERBP1P1-201ENST00000396021 1160 ntBASIC21.95■■□□□ 1.1
DNMT3AQ9Y6K1 AL499627.2-201ENST00000606283 725 ntBASIC21.95■■□□□ 1.1
DNMT3AQ9Y6K1 AL136162.1-201ENST00000607711 1078 ntBASIC21.95■■□□□ 1.1
DNMT3AQ9Y6K1 AC011298.3-201ENST00000615796 283 ntBASIC21.95■■□□□ 1.1
DNMT3AQ9Y6K1 AC106739.1-201ENST00000617035 715 ntBASIC21.95■■□□□ 1.1
DNMT3AQ9Y6K1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DNMT3AQ9Y6K1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
DNMT3AQ9Y6K1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
DNMT3AQ9Y6K1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.94■■□□□ 1.1
DNMT3AQ9Y6K1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DNMT3AQ9Y6K1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
DNMT3AQ9Y6K1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
DNMT3AQ9Y6K1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DNMT3AQ9Y6K1 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.94■■□□□ 1.1
DNMT3AQ9Y6K1 AC006455.2-201ENST00000429931 906 ntBASIC21.94■■□□□ 1.1
DNMT3AQ9Y6K1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.94■■□□□ 1.1
DNMT3AQ9Y6K1 MIR3181-201ENST00000578512 73 ntBASIC21.94■■□□□ 1.1
DNMT3AQ9Y6K1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.94■■□□□ 1.1
DNMT3AQ9Y6K1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
DNMT3AQ9Y6K1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.94■■□□□ 1.1
DNMT3AQ9Y6K1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DNMT3AQ9Y6K1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DNMT3AQ9Y6K1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DNMT3AQ9Y6K1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DNMT3AQ9Y6K1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
DNMT3AQ9Y6K1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
DNMT3AQ9Y6K1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.93■■□□□ 1.1
DNMT3AQ9Y6K1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
DNMT3AQ9Y6K1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DNMT3AQ9Y6K1 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.93■■□□□ 1.1
DNMT3AQ9Y6K1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.93■■□□□ 1.1
DNMT3AQ9Y6K1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DNMT3AQ9Y6K1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.93■■□□□ 1.1
DNMT3AQ9Y6K1 AC092068.2-201ENST00000590491 1708 ntBASIC21.93■■□□□ 1.1
DNMT3AQ9Y6K1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DNMT3AQ9Y6K1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
DNMT3AQ9Y6K1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
DNMT3AQ9Y6K1 AC135279.3-201ENST00000610945 1311 ntBASIC21.92■■□□□ 1.1
DNMT3AQ9Y6K1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.92■■□□□ 1.1
DNMT3AQ9Y6K1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.92■■□□□ 1.1
DNMT3AQ9Y6K1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DNMT3AQ9Y6K1 PBX2P1-201ENST00000493219 1291 ntBASIC21.92■■□□□ 1.1
DNMT3AQ9Y6K1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.92■■□□□ 1.1
DNMT3AQ9Y6K1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.92■■□□□ 1.1
DNMT3AQ9Y6K1 pRNA.6-201ENST00000610482 90 ntBASIC21.92■■□□□ 1.1
DNMT3AQ9Y6K1 pRNA.5-201ENST00000612139 90 ntBASIC21.92■■□□□ 1.1
DNMT3AQ9Y6K1 pRNA.11-201ENST00000618423 90 ntBASIC21.92■■□□□ 1.1
DNMT3AQ9Y6K1 pRNA.13-201ENST00000619112 90 ntBASIC21.92■■□□□ 1.1
DNMT3AQ9Y6K1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
DNMT3AQ9Y6K1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DNMT3AQ9Y6K1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DNMT3AQ9Y6K1 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.92■■□□□ 1.1
DNMT3AQ9Y6K1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.92■■□□□ 1.1
DNMT3AQ9Y6K1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DNMT3AQ9Y6K1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.91■■□□□ 1.1
DNMT3AQ9Y6K1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DNMT3AQ9Y6K1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DNMT3AQ9Y6K1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.91■■□□□ 1.1
DNMT3AQ9Y6K1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.91■■□□□ 1.1
DNMT3AQ9Y6K1 ANOS2P-203ENST00000472227 1816 ntBASIC21.91■■□□□ 1.1
DNMT3AQ9Y6K1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.91■■□□□ 1.1
DNMT3AQ9Y6K1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DNMT3AQ9Y6K1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
DNMT3AQ9Y6K1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
DNMT3AQ9Y6K1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.9■■□□□ 1.1
DNMT3AQ9Y6K1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DNMT3AQ9Y6K1 AC024257.2-201ENST00000549699 147 ntBASIC21.9■■□□□ 1.1
DNMT3AQ9Y6K1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
DNMT3AQ9Y6K1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.9■■□□□ 1.1
DNMT3AQ9Y6K1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.89■■□□□ 1.1
DNMT3AQ9Y6K1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.89■■□□□ 1.1
DNMT3AQ9Y6K1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
DNMT3AQ9Y6K1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
DNMT3AQ9Y6K1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
DNMT3AQ9Y6K1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DNMT3AQ9Y6K1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
DNMT3AQ9Y6K1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DNMT3AQ9Y6K1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
DNMT3AQ9Y6K1 AC136469.2-201ENST00000623944 1028 ntBASIC21.89■■□□□ 1.09
DNMT3AQ9Y6K1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DNMT3AQ9Y6K1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
DNMT3AQ9Y6K1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
DNMT3AQ9Y6K1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DNMT3AQ9Y6K1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DNMT3AQ9Y6K1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
DNMT3AQ9Y6K1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DNMT3AQ9Y6K1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DNMT3AQ9Y6K1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms