Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CYP46A1Q9Y6A2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.59■■□□□ 1.85
CYP46A1Q9Y6A2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
CYP46A1Q9Y6A2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.59■■□□□ 1.85
CYP46A1Q9Y6A2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CYP46A1Q9Y6A2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC26.58■■□□□ 1.85
CYP46A1Q9Y6A2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CYP46A1Q9Y6A2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
CYP46A1Q9Y6A2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.58■■□□□ 1.85
CYP46A1Q9Y6A2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
CYP46A1Q9Y6A2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
CYP46A1Q9Y6A2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.58■■□□□ 1.85
CYP46A1Q9Y6A2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.58■■□□□ 1.85
CYP46A1Q9Y6A2 MIR4787-201ENST00000607364 84 ntBASIC26.58■■□□□ 1.85
CYP46A1Q9Y6A2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.58■■□□□ 1.85
CYP46A1Q9Y6A2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CYP46A1Q9Y6A2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CYP46A1Q9Y6A2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CYP46A1Q9Y6A2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
CYP46A1Q9Y6A2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CYP46A1Q9Y6A2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CYP46A1Q9Y6A2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
CYP46A1Q9Y6A2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CYP46A1Q9Y6A2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CYP46A1Q9Y6A2 AC239859.2-201ENST00000444165 318 ntBASIC26.57■■□□□ 1.84
CYP46A1Q9Y6A2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.57■■□□□ 1.84
CYP46A1Q9Y6A2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.57■■□□□ 1.84
CYP46A1Q9Y6A2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CYP46A1Q9Y6A2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
CYP46A1Q9Y6A2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
CYP46A1Q9Y6A2 AC009299.2-201ENST00000482477 511 ntBASIC26.56■■□□□ 1.84
CYP46A1Q9Y6A2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.56■■□□□ 1.84
CYP46A1Q9Y6A2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CYP46A1Q9Y6A2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CYP46A1Q9Y6A2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
CYP46A1Q9Y6A2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.56■■□□□ 1.84
CYP46A1Q9Y6A2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CYP46A1Q9Y6A2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.55■■□□□ 1.84
CYP46A1Q9Y6A2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CYP46A1Q9Y6A2 AC144652.1-201ENST00000609974 1624 ntBASIC26.55■■□□□ 1.84
CYP46A1Q9Y6A2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CYP46A1Q9Y6A2 AL451085.2-201ENST00000605085 799 ntBASIC26.55■■□□□ 1.84
CYP46A1Q9Y6A2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CYP46A1Q9Y6A2 AC233723.2-201ENST00000623798 2106 ntBASIC26.54■■□□□ 1.84
CYP46A1Q9Y6A2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CYP46A1Q9Y6A2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CYP46A1Q9Y6A2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CYP46A1Q9Y6A2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CYP46A1Q9Y6A2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CYP46A1Q9Y6A2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
CYP46A1Q9Y6A2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CYP46A1Q9Y6A2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
CYP46A1Q9Y6A2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.53■■□□□ 1.84
CYP46A1Q9Y6A2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CYP46A1Q9Y6A2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CYP46A1Q9Y6A2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
CYP46A1Q9Y6A2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
CYP46A1Q9Y6A2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CYP46A1Q9Y6A2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CYP46A1Q9Y6A2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CYP46A1Q9Y6A2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.52■■□□□ 1.84
CYP46A1Q9Y6A2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CYP46A1Q9Y6A2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CYP46A1Q9Y6A2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CYP46A1Q9Y6A2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CYP46A1Q9Y6A2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.52■■□□□ 1.84
CYP46A1Q9Y6A2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
CYP46A1Q9Y6A2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
CYP46A1Q9Y6A2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CYP46A1Q9Y6A2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
CYP46A1Q9Y6A2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CYP46A1Q9Y6A2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.51■■□□□ 1.83
CYP46A1Q9Y6A2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CYP46A1Q9Y6A2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.51■■□□□ 1.83
CYP46A1Q9Y6A2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
CYP46A1Q9Y6A2 MTDHP2-201ENST00000601468 714 ntBASIC26.51■■□□□ 1.83
CYP46A1Q9Y6A2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CYP46A1Q9Y6A2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CYP46A1Q9Y6A2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.51■■□□□ 1.83
CYP46A1Q9Y6A2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CYP46A1Q9Y6A2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CYP46A1Q9Y6A2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CYP46A1Q9Y6A2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
CYP46A1Q9Y6A2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.5■■□□□ 1.83
CYP46A1Q9Y6A2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC26.5■■□□□ 1.83
CYP46A1Q9Y6A2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CYP46A1Q9Y6A2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
CYP46A1Q9Y6A2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
CYP46A1Q9Y6A2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CYP46A1Q9Y6A2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CYP46A1Q9Y6A2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CYP46A1Q9Y6A2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.49■■□□□ 1.83
CYP46A1Q9Y6A2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CYP46A1Q9Y6A2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CYP46A1Q9Y6A2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.48■■□□□ 1.83
CYP46A1Q9Y6A2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.48■■□□□ 1.83
CYP46A1Q9Y6A2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CYP46A1Q9Y6A2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CYP46A1Q9Y6A2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.48■■□□□ 1.83
CYP46A1Q9Y6A2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms